RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 EXTL1Q92935 676 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 ELMO2Q96JJ3 720 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 SLC45A3Q96JT2 553 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 RHOXF2Q9BQY4 288 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 PITPNM3Q9BZ71 974 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 DDX47Q9H0S4 455 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 P2RY12Q9H244 342 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 TFB2MQ9H5Q4 396 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 MRM3Q9HC36 420 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 CATSPERZQ9NTU4 200 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 SOX13Q9UN79 622 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 BTRCQ9Y297 605 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 GCN1Q92616 2671 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 PIEZO2Q9H5I5 2752 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 UQCRHLA0A096LP55 91 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 UBA6A0AVT1 1052 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 EIF4E1BA6NMX2 242 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 IQCF5A8MTL0 148 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 EFCAB8A8MWE9 144 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 MATN2O00339 956 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 PHF2O75151 1096 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 SPAG6O75602 509 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 KIAA0754O94854 1291 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 ZBTB11O95625 1053 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 UQCRHP07919 91 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 OR56A5P0C7T3 313 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 ITGB6P18564 788 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 F8A1P23610 371 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 COILP38432 576 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 NPY2RP49146 381 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 HSD11B2P80365 405 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 GPS1Q13098 491 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 KRT33BQ14525 404 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 BRD3Q15059 726 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 TBR1Q16650 682 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 SYTL3Q4VX76 610 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 FASTKD1Q53R41 847 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 PWWP2BQ6NUJ5 590 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 CAND1Q86VP6 1230 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 PPP1R3BQ86XI6 285 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 SLC22A15Q8IZD6 547 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 KRT222Q8N1A0 295 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 EXD3Q8N9H8 876 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 NOA1Q8NC60 698 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 GALNT6Q8NCL4 622 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 MYRIPQ8NFW9 859 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 FLVCR1-AS1Q8TAF5 88 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 LCN9Q8WX39 176 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 CPT1BQ92523 772 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF501Q96CX3 271 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 MFSD3Q96ES6 412 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 TRIM56Q9BRZ2 755 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 TRIT1Q9H3H1 467 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 SRMSQ9H3Y6 488 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 XKR8Q9H6D3 395 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 GPN2Q9H9Y4 310 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 FGF21Q9NSA1 209 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 MRPS18BQ9Y676 258 aaKnown RBP10.02□□□□□ -0.81
SHMT2-224ENST00000556737 RPS6KL1Q9Y6S9 549 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF462Q96JM2 2506 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 BAHCC1Q9P281 2608 aa10.02□□□□□ -0.81
SHMT2-224ENST00000556737 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 SLC9B1P1A6NJY1 282 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF891A8MT65 544 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 AP3B1O00203 1094 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PRMT5O14744 637 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CD3EAPO15446 510 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 AVILO75366 819 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 GPC4O75487 556 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 KRT14P02533 472 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PVRP15151 417 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ST6GAL1P15907 406 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 OAS2P29728 719 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PRDX3P30048 256 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PEBP1P30086 187 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 MAGEA3P43357 314 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 TTPAP49638 278 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 TERF1P54274 439 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 TUBB4BP68371 445 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ACY1Q03154 408 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CDC20Q12834 499 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ABRQ12979 859 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PRKG2Q13237 762 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 GRB7Q14451 532 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 PPP1R7Q15435 360 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 GPR19Q15760 415 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 TYSND1Q2T9J0 566 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ZNF789Q5FWF6 425 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 AARS2Q5JTZ9 985 aaKnown RBP10.01□□□□□ -0.81
SHMT2-224ENST00000556737 CTSL3PQ5NE16 218 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 ATP1A1-AS1Q5TC04 95 aa10.01□□□□□ -0.81
SHMT2-224ENST00000556737 KIAA0930Q6ICG6 404 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms