RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 KLHL25Q9H0H3 589 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 RUBCNLQ9H714 662 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 ASB8Q9H765 288 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 MVB12BQ9H7P6 319 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 IFT80Q9P2H3 777 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 NDOR1Q9UHB4 597 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 SRPK3Q9UPE1 567 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 F8P00451 2351 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 OTOGQ6ZRI0 2925 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 FBN2P35556 2912 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 ARHGAP10A1A4S6 786 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 C2orf81A6NN90 581 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 SGTAO43765 313 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 SRP72O76094 671 aaKnown RBP11.49□□□□□ -0.57
ACTN1-221ENST00000556571 KRT1P04264 644 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PRF1P14222 555 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PBX1P40424 430 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 ARHGAP25P42331 645 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 CD151P48509 253 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PRLHRP49683 370 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 AIMP2Q13155 320 aaKnown RBP11.49□□□□□ -0.57
ACTN1-221ENST00000556571 TRIM14Q14142 442 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PTPRCAPQ14761 206 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 C1orf189Q5VU69 101 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PID1Q7Z2X4 250 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 HOOK3Q86VS8 718 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 AMIGO1Q86WK6 493 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 ADGRF3Q8IZF5 1079 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 IPMKQ8NFU5 416 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 OR52E1Q8NGJ3 308 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PPP4R1Q8TF05 950 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 NAT14Q8WUY8 206 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 HEXDCQ8WVB3 486 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-221ENST00000556571 GBP5Q96PP8 586 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PACSIN1Q9BY11 444 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 ZBTB20Q9HC78 741 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-221ENST00000556571 ACTR10Q9NZ32 417 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 KLHL8Q9P2G9 620 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-221ENST00000556571 OSGIN2Q9Y236 505 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 PCSK5Q92824 1860 aa11.49□□□□□ -0.57
ACTN1-221ENST00000556571 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 AGAP14A8MT82 685 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 CFAP99D6REC4 459 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 H3BMH7 237 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 AGPSO00116 658 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 EDN3P14138 238 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ITGA3P26006 1051 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 TSFMP43897 325 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 TFDP2Q14188 446 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 TAF1AQ15573 450 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ZNF449Q6P9G9 518 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 SPESP1Q6UW49 350 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ZNF567Q8N184 647 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 C19orf47Q8N9M1 422 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 OR4K2Q8NGD2 314 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 SLC35G2Q8TBE7 412 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 DNAJB14Q8TBM8 379 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 GRHL3Q8TE85 626 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 FAR1Q8WVX9 515 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ULK4Q96C45 1275 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 COPS8Q99627 209 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 CHRNA10Q9GZZ6 450 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 SPRTNQ9H040 489 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 OR52A5Q9H2C5 316 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 COG4Q9H9E3 785 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 FAM60AQ9NP50 221 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 TXLNGQ9NUQ3 528 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 SAE1Q9UBE0 346 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 FKBPLQ9UIM3 349 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 CRLS1Q9UJA2 301 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 NOVA2Q9UNW9 492 aaKnown RBP11.48□□□□□ -0.57
ACTN1-221ENST00000556571 CDYLQ9Y232 598 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 ARL5AQ9Y689 179 aa11.48□□□□□ -0.57
ACTN1-221ENST00000556571 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 MASP2O00187 686 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 ZSCAN9O15535 394 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-221ENST00000556571 ZG16O60844 167 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 CNOT3O75175 753 aaKnown RBP11.47□□□□□ -0.57
ACTN1-221ENST00000556571 UMODP07911 640 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 TMEM253P0C7T8 217 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 ATP1B2P14415 290 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-221ENST00000556571 GABRA4P48169 554 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 XIAPP98170 497 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 RPA4Q13156 261 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 BOP1Q14137 746 aaKnown RBP11.47□□□□□ -0.57
ACTN1-221ENST00000556571 HIF1AQ16665 826 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 NKAIN1Q4KMZ8 207 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 AGAP7PQ5VUJ5 663 aa11.47□□□□□ -0.57
ACTN1-221ENST00000556571 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms