RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RNF8O76064 485 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KIAA0754O94854 1291 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 GAS8O95995 478 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CHEK2O96017 543 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KRT7P08729 469 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SPARCP09486 303 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 IQCF3P0C7M6 154 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KCNE1P15382 129 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CD58P19256 250 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CPT2P23786 658 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PPARGP37231 505 aaPredicted RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 ACADSBP45954 432 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 GABRB2P47870 512 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 LMAN1P49257 510 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PEX5P50542 639 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CDK7P50613 346 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CACNA2D1P54289 1103 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SLC8A3P57103 927 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MRPS6P82932 125 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 DR1Q01658 176 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CAV1Q03135 178 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 DMTNQ08495 405 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 EIF2B5Q13144 721 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 CAMK2DQ13557 499 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 ITGA7Q13683 1181 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PCLAFQ15004 111 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MED22Q15528 200 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 NTRK2Q16620 822 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CCL14Q16627 93 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 CYP1B1Q16678 543 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 GALNTL6Q49A17 601 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PRAMEF19Q5SWL8 479 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 LIPMQ5VYY2 423 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SCARA5Q6ZMJ2 495 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 OTOAQ7RTW8 1153 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 ADGRG6Q86SQ4 1221 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 DNAAF5Q86Y56 855 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SLC13A5Q86YT5 568 aaPredicted RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 ZDHHC17Q8IUH5 632 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 RASGRP3Q8IV61 690 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KLHL7Q8IXQ5 586 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PEX5LQ8IYB4 626 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KATNAL2Q8IYT4 538 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 RCOR2Q8IZ40 523 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 NIPA2Q8N8Q9 360 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 BOLLQ8N9W6 283 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 BBOF1Q8ND07 529 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 EXD1Q8NHP7 514 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MYCBPAPQ8TBZ2 947 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 AENQ8WTP8 325 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 DNAJB3Q8WWF6 145 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SPSB4Q96A44 273 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MAGOHBQ96A72 148 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 ZNF668Q96K58 619 aaPredicted RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 CCDC114Q96M63 670 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 LENG8Q96PV6 779 aaPredicted RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 TUBB6Q9BUF5 446 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 FRMD8P1Q9BZ68 369 aaPredicted RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 SLAMF7Q9NQ25 335 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 ASNSD1Q9NWL6 643 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 FLRT1Q9NZU1 646 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PTGFRNQ9P2B2 879 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 HESX1Q9UBX0 185 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MTRF1LQ9UGC7 380 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 SLCO3A1Q9UIG8 710 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SIX4Q9UIU6 781 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 ZDHHC8Q9ULC8 765 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 PIN4Q9Y237 131 aaKnown RBP5.12□□□□□ -1.59
SRP54-211ENST00000556445 GINS2Q9Y248 185 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 TRPV2Q9Y5S1 764 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 KCNE2Q9Y6J6 123 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SQORQ9Y6N5 450 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 UMODL1Q5DID0 1318 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SCN10AQ9Y5Y9 1956 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 RNF103-CHMP3A0A140T963 221 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 hCG_1809904A0A1W2PP81 198 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 A0A1W2PPE2 198 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 A0A1W2PR64 198 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 LRRD1A4D1F6 860 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 OR2W5A6NFC9 320 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 GOLGA6L10A6NI86 522 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 GOLGA8KD6RF30 607 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 RNF103O00237 685 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TULP3O75386 442 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 RPS6KA5O75582 802 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 BCAS2O75934 225 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 TJP3O95049 919 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 OR2C1O95371 312 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ERBB2P04626 1255 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 KRT3P12035 628 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SELLP14151 372 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 PPP3CBP16298 524 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TYMPP19971 482 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SAT1P21673 171 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 ACVR2AP27037 513 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 COILP38432 576 aaPredicted RBP5.11□□□□□ -1.59
SRP54-211ENST00000556445 IFNAR2P48551 515 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 TAF6P49848 677 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 SULT1E1P49888 294 aa5.11□□□□□ -1.59
SRP54-211ENST00000556445 HNMTP50135 292 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms