RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CACNG1Q06432 222 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 PARP6Q2NL67 630 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 NADK2Q4G0N4 442 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 MICALCLQ6ZW33 695 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 ADGRF3Q8IZF5 1079 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 CLDN19Q8N6F1 224 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 CPT1CQ8TCG5 803 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 NRTNQ99748 197 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 SLC7A5P2Q9GIP4 190 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 LRRC40Q9H9A6 602 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 ACTR10Q9NZ32 417 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 VPS4AQ9UN37 437 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 ZNF451Q9Y4E5 1061 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 ESPL1Q14674 2120 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 ICE1Q9Y2F5 2266 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 E7EQ34 232 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 AP2A2O94973 939 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 HBQ1P09105 142 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 PVRP15151 417 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 VAV2P52735 878 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 PRKG2Q13237 762 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 NCF4Q15080 339 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 DBN1Q16643 649 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 CDHR3Q6ZTQ4 885 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 TMTC1Q8IUR5 882 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 PIANPQ8IYJ0 282 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 GALNT11Q8NCW6 608 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 STYXQ8WUJ0 223 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 CDKN2AIPNLQ96HQ2 116 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 PSMG3-AS1Q96PY0 264 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 DPH2Q9BQC3 489 aaPredicted RBP18.23■□□□□ 0.51
CDKN3-209ENST00000556102 KLHL25Q9H0H3 589 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 XKR8Q9H6D3 395 aa18.23■□□□□ 0.51
CDKN3-209ENST00000556102 G3BP2Q9UN86 482 aaKnown RBP18.23■□□□□ 0.51
CDKN3-209ENST00000556102 REXO2Q9Y3B8 237 aaKnown RBP18.23■□□□□ 0.51
CDKN3-209ENST00000556102 SNRNP200O75643 2136 aaKnown RBP18.23■□□□□ 0.51
CDKN3-209ENST00000556102 CCDC88CQ9P219 2028 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 BLACEA4D250 179 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 GOLGA6L9A6NEM1 432 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 LIN7AO14910 233 aaPredicted RBP18.22■□□□□ 0.51
CDKN3-209ENST00000556102 ZNF749O43361 778 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 SORBS2O94875 1100 aaKnown RBP18.22■□□□□ 0.51
CDKN3-209ENST00000556102 METTL18O95568 372 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 TPH1P17752 444 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 UQCRFS1P47985 274 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 POU6F1Q14863 301 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 PTCHD3Q3KNS1 767 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 FAM69BQ5VUD6 431 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 ZNF385CQ66K41 422 aaPredicted RBP18.22■□□□□ 0.51
CDKN3-209ENST00000556102 SPESP1Q6UW49 350 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 MED25Q71SY5 747 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 HOOK3Q86VS8 718 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 TMEM102Q8N9M5 508 aaPredicted RBP18.22■□□□□ 0.51
CDKN3-209ENST00000556102 FAM71DQ8N9W8 422 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 LACRTQ9GZZ8 138 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 SMARCAL1Q9NZC9 954 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 ICKQ9UPZ9 632 aa18.22■□□□□ 0.51
CDKN3-209ENST00000556102 GRID2IPA4D2P6 1211 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 C9J4A7 227 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 QSOX1O00391 747 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 PTMAP06454 111 aaKnown RBP18.21■□□□□ 0.51
CDKN3-209ENST00000556102 AGXTP21549 392 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 GNLYP22749 145 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 SHMT2P34897 504 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 NSG1P42857 185 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 ITIH4Q14624 930 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 P3H1Q32P28 736 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 RAB43Q86YS6 212 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 HPS6Q86YV9 775 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 GPR135Q8IZ08 494 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 ZBTB2Q8N680 514 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 C19orf47Q8N9M1 422 aaKnown RBP18.21■□□□□ 0.51
CDKN3-209ENST00000556102 GLIS1Q8NBF1 620 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 FDCSPQ8NFU4 85 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 OR5AR1Q8NGP9 310 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDKN3-209ENST00000556102 ALS2CR12Q96Q35 445 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 DHRS4Q9BTZ2 278 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 PADI2Q9Y2J8 665 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 MAP4K5Q9Y4K4 846 aa18.21■□□□□ 0.51
CDKN3-209ENST00000556102 PRRC2CQ9Y520 2896 aaKnown RBP18.2■□□□□ 0.5
CDKN3-209ENST00000556102 PSMD3O43242 534 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 DPM1O60762 260 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 AP2A1O95782 977 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 PSMA3P25788 255 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 MSNP26038 577 aaKnown RBP18.2■□□□□ 0.5
CDKN3-209ENST00000556102 RRADP55042 308 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 PACS1Q6VY07 963 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 ELMO1Q92556 727 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 N4BP2L2Q92802 583 aaPredicted RBP18.2■□□□□ 0.5
CDKN3-209ENST00000556102 TCTN2Q96GX1 697 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 C17orf62Q9BQA9 187 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 NUDT9Q9BW91 350 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 CHRNA10Q9GZZ6 450 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 LRRC4CQ9HCJ2 640 aa18.2■□□□□ 0.5
CDKN3-209ENST00000556102 FAM60AQ9NP50 221 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms