RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 BECN1Q14457 450 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 CFAP58Q5T655 872 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 ARHGAP11AQ6P4F7 1023 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 ZNF554Q86TJ5 538 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 ZNF383Q8NA42 475 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 OR10S1Q8NGN2 331 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 FGFBP3Q8TAT2 258 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 GRHL3Q8TE85 626 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 HSD17B8Q92506 261 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 DGAT2Q96PD7 388 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 LITAFQ99732 161 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 BTBD10Q9BSF8 475 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 APOL6Q9BWW8 343 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 A4GALTQ9NPC4 353 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 GDE1Q9NZC3 331 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 FAM169AQ9Y6X4 670 aa5.28□□□□□ -1.56
LINC00871-202ENST00000556071 PASKQ96RG2 1323 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 hCG_1809904A0A1W2PP81 198 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 A0A1W2PPE2 198 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 A0A1W2PR64 198 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 DNM1LO00429 736 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 TSPAN1O60635 241 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 FRMD6-AS1P0C7T7 363 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 AKR1B1P15121 316 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 LMAN1P49257 510 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 LIG4P49917 911 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 TOMM20Q15388 145 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 SNAPC1Q16533 368 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 MRGPRG-AS1Q2M3A8 158 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 KIAA1644Q3SXP7 199 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 DCAF10Q5QP82 559 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 RNASEH2BQ5TBB1 312 aaKnown RBP5.27□□□□□ -1.57
LINC00871-202ENST00000556071 ADAM5Q6NVV9 412 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 CLEC4GQ6UXB4 293 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 GSG1LQ6UXU4 331 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 SH2D5Q6ZV89 423 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 COMMD2Q86X83 199 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 TRIML1Q8N9V2 468 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 PPFIBP2Q8ND30 876 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 OR13J1Q8NGT2 312 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 TMEM143Q96AN5 459 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 LGALS12Q96DT0 336 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 SPACA9Q96E40 222 aaPredicted RBP5.27□□□□□ -1.57
LINC00871-202ENST00000556071 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 ERRFI1Q9UJM3 462 aaPredicted RBP5.27□□□□□ -1.57
LINC00871-202ENST00000556071 MTUS1Q9ULD2 1270 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 KCNJ14Q9UNX9 436 aa5.27□□□□□ -1.57
LINC00871-202ENST00000556071 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 WDPCPO95876 746 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 NGFP01138 241 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 OR2T7P0C7T2 308 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 MAP2K2P36507 400 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 ATP12AP54707 1039 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 GNB1P62873 340 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 TMEM30BQ3MIR4 351 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 CBWD6Q4V339 395 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 CBWD3Q5JTY5 395 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 C16orf54Q6UWD8 224 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 CFAP206Q8IYR0 622 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 ARHGAP24Q8N264 748 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 AVL9Q8NBF6 648 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 EXD1Q8NHP7 514 aa5.26□□□□□ -1.57
LINC00871-202ENST00000556071 TMEM221A6NGB7 291 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 ABCB1P08183 1280 aaPredicted RBP5.25□□□□□ -1.57
LINC00871-202ENST00000556071 GNB3P16520 340 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 BDNFP23560 247 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 ITGA3P26006 1051 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 CEACAM8P31997 349 aaPredicted RBP5.25□□□□□ -1.57
LINC00871-202ENST00000556071 IL11RAQ14626 422 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 NXNL1Q96CM4 212 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 CCDC106Q9BWC9 280 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 RBM4Q9BWF3 364 aaKnown RBP5.25□□□□□ -1.57
LINC00871-202ENST00000556071 OPA3Q9H6K4 179 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 B3GAT1Q9P2W7 334 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 NME7Q9Y5B8 376 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 TRPV2Q9Y5S1 764 aa5.25□□□□□ -1.57
LINC00871-202ENST00000556071 STK36Q9NRP7 1315 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 HHLA1C9JL84 531 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 ZNF197O14709 1029 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 MEIS2O14770 477 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 IPO8O15397 1037 aaKnown RBP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 GAS8-AS1O95177 125 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PIGNO95427 931 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 NADKO95544 446 aaPredicted RBP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 CLPTM1O96005 669 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 APOHP02749 345 aaPredicted RBP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PFKFB1P16118 471 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 SLC6A6P31641 620 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 SLC9A3P48764 834 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PDX1P52945 283 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 B3GALT5-AS1P59052 145 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 HNRNPKP61978 463 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PPIGQ13427 754 aaKnown RBP eCLIP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PHLDA2Q53GA4 152 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 GPR139Q6DWJ6 353 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 PRPF39Q86UA1 669 aaKnown RBP5.24□□□□□ -1.57
LINC00871-202ENST00000556071 TMEM190Q8WZ59 177 aa5.24□□□□□ -1.57
LINC00871-202ENST00000556071 SPDL1Q96EA4 605 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms