RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 IL1RAPL1Q9NZN1 696 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-215ENST00000555616 PDP2Q9P2J9 529 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 PSMC3IPQ9P2W1 217 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-215ENST00000555616 CPNE7Q9UBL6 633 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 PISDQ9UG56 409 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 CRLS1Q9UJA2 301 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 FBXO5Q9UKT4 447 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 NFS1Q9Y697 457 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 LOC400499M0QZD8 3231 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 ADAMTS20P59510 1910 aa9.43□□□□□ -0.9
ACTN1-215ENST00000555616 MN1Q10571 1320 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 TRBV23OR9-2A0A075B6M9 112 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 IQANK1A0A1B0GTG1 560 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 TLDC2A0PJX2 215 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 OR51F1A6NGY5 319 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SMIM23A6NLE4 172 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 CXorf49A8MYA2 514 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 NVLO15381 856 aaKnown RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 KCNJ13O60928 360 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 NDUFS3O75489 264 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 HOXB3P14651 431 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 XRCC1P18887 633 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 ITIH1P19827 911 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 IDSP22304 550 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 ATP5DP30049 168 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SLC5A2P31639 672 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 FOXN2P32314 431 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 ETV5P41161 510 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SLC1A2P43004 574 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SLCO1A2P46721 670 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 CSE1LP55060 971 aaKnown RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 UCNP55089 124 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 COL9A2Q14055 689 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 TYSND1Q2T9J0 566 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 BCL7AQ4VC05 210 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 GRTP1Q5TC63 336 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 TMEM71Q6P5X7 295 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 PACS1Q6VY07 963 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 DENND6AQ8IWF6 608 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 EPS8L3Q8TE67 593 aaKnown RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 HEXDCQ8WVB3 486 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 DHRS4Q9BTZ2 278 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 CENPHQ9H3R5 247 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 SMYD2Q9NRG4 433 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 AKAP7Q9P0M2 348 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 TMEM9Q9P0T7 183 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 MARCH4Q9P2E8 410 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 ZNF624Q9P2J8 865 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 DNAJC16Q9Y2G8 782 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 ARHGEF17Q96PE2 2063 aaPredicted RBP9.42□□□□□ -0.9
ACTN1-215ENST00000555616 CACNA1GO43497 2377 aa9.42□□□□□ -0.9
ACTN1-215ENST00000555616 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 IGLV3-16A0A075B6K0 115 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 TRBV5-4A0A0C4DH59 114 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PRAMEF33A0A0G2JMD5 474 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 KLHL33A6NCF5 533 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 OR2AG2A6NM03 316 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CFAP99D6REC4 459 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 F8W8V4 182 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RGS16O15492 202 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 KLK10O43240 276 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SGTAO43765 313 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RRP9O43818 475 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PRAMEF10O60809 474 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 POP7O75817 140 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PIAS1O75925 651 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RALBP11234 206 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 MSH3P20585 1137 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 AKT1P31749 480 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SLC19A1P41440 591 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 LEPRP48357 1165 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CD151P48509 253 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 TMPRSS3P57727 454 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CLN3Q13286 438 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 CTBP1Q13363 440 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 TMED2Q15363 201 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SEPT7Q16181 437 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 ADGRD1Q6QNK2 874 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 FAM83HQ6ZRV2 1179 aaPredicted RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 AMZ2Q86W34 360 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SERPINA9Q86WD7 417 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 TRIM48Q8IWZ4 208 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RBM12BQ8IXT5 1001 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 NXPE1Q8N323 547 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 AGBL5Q8NDL9 886 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 RCBTB1Q8NDN9 531 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 DCAKDQ8WVC6 231 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 SNRNP27Q8WVK2 155 aaKnown RBP9.41□□□□□ -0.9
ACTN1-215ENST00000555616 MTBPQ96DY7 904 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 PGM2Q96G03 612 aa9.41□□□□□ -0.9
ACTN1-215ENST00000555616 AHCYL2Q96HN2 611 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms