RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PLIN3O60664 434 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 NDUFS3O75489 264 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 LDOC1O95751 146 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 ALDOAP04075 364 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 MPOP05164 745 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 ERVK-10P10266 1014 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 MYL2P10916 166 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 RPL10P27635 214 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SERPINB8P50452 374 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 CCNG1P51959 295 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 CSE1LP55060 971 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 CCDC153Q494R4 210 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 NAPRTQ6XQN6 538 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 LCA5Q86VQ0 697 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 NRROSQ86YC3 692 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 ZNF547Q8IVP9 402 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 FSTL5Q8N475 847 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 AGAP11Q8TF27 550 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 PATE1Q8WXA2 126 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 TTC1Q99614 292 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 RBBP8Q99708 897 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 BTBD10Q9BSF8 475 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SLC32A1Q9H598 525 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SPATS2LQ9NUQ6 558 aaKnown RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 SMOXQ9NWM0 555 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 TAAR2Q9P1P5 351 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 PCDHGB2Q9Y5G2 931 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 PRSS21Q9Y6M0 314 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 ANKRD12Q6UB98 2062 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 KNTC1P50748 2209 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 PDZK1P1A8MUH7 402 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TPP1O14773 563 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 KMOO15229 486 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 POP7O75817 140 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 CBX6O95503 412 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SERPINE1P05121 402 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 GIMD1P0DJR0 217 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ATP1B2P14415 290 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ZNF7P17097 686 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ARNTP27540 789 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SERPINB3P29508 390 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ID4P47928 161 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PPM1FP49593 454 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 LIMK2P53671 638 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SIM1P81133 766 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ACVR1Q04771 509 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 CTBP1Q13363 440 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 BIRC2Q13490 618 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TRIP6Q15654 476 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 HSP90AA5PQ58FG0 334 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 N4BP2L1Q5TBK1 243 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ZNF470Q6ECI4 717 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 KIAA0930Q6ICG6 404 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 NEPROQ6NW34 567 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SDCCAG8Q86SQ7 713 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 WDR75Q8IWA0 830 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 DENND6AQ8IWF6 608 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ARHGAP24Q8N264 748 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 KYQ8NBH2 561 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 FAM13CQ8NE31 585 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 OR4C6Q8NH72 309 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PPP1R14CQ8TAE6 165 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 GPBAR1Q8TDU6 330 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ZDHHC1Q8WTX9 485 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 FAM136AQ96C01 138 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 APOLD1Q96LR9 279 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SYNDIG1Q9H7V2 258 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 RMI1Q9H9A7 625 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PRDM8Q9NQV8 689 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 FBXO6Q9NRD1 293 aaPredicted RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TRNAU1APQ9NX07 287 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 NLGN3Q9NZ94 848 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SLC17A6Q9P2U8 582 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 RIMKLBQ9ULI2 386 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PSMD13Q9UNM6 376 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PCDHGA10Q9Y5H3 936 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TRBV5-4A0A0C4DH59 114 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ZCWPW2A0A1B0GU75 182 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 IQCF5A8MTL0 148 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 FCHO1O14526 889 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 H2AFYO75367 372 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TRIM16O95361 564 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 EML2O95834 649 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PROCP04070 461 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 APOA4P06727 396 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SDHBP21912 280 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PSMA3P25788 255 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TYK2P29597 1187 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 FMO4P31512 558 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ABCG1P45844 678 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ARCN1P48444 511 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 MAZP56270 477 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 NFE2L1Q14494 772 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 AARS2Q5JTZ9 985 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms