RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ATP5BP06576 529 aaKnown RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 HOXC8P31273 242 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF132P52740 706 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 COASYQ13057 564 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 KIR2DS3Q14952 304 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 ASIC2Q16515 512 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 SIRPB2Q5JXA9 342 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 MFSD12Q6NUT3 480 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 SPSB3Q6PJ21 355 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 DCLRE1AQ6PJP8 1040 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 SUSD1Q6UWL2 747 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 PPP1R21Q6ZMI0 780 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF517Q6ZMY9 492 aaPredicted RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 DGLUCYQ7Z3D6 616 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 CCAR2Q8N163 923 aaKnown RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF611Q8N823 705 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 RNF128Q8TEB7 428 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 CCDC107Q8WV48 283 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 EXT2Q93063 718 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 MOB3AQ96BX8 217 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 SGK494Q96LW2 274 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 MUS81Q96NY9 551 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 CITED2Q99967 270 aaPredicted RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 MGME1Q9BQP7 344 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 FAM129AQ9BZQ8 928 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 APOBEC3GQ9HC16 384 aaKnown RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 TCF7L2Q9NQB0 619 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 OLFML3Q9NRN5 406 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 SLC38A7Q9NVC3 462 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 IGLV5-45A0A087WSX0 123 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 ARHGEF37A1IGU5 675 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 ANXA2P2A6NMY6 339 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRAC2D3DTV9 90 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 CTSVO60911 334 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 CBLP22681 906 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 DGKAP23743 735 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 FMO5P49326 533 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 EEF1A2Q05639 463 aaKnown RBP5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 SOS1Q07889 1333 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 TRIP12Q14669 1992 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF585BQ52M93 769 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 TRAT1Q6PIZ9 186 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 DSG4Q86SJ6 1040 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 SLC9B2Q86UD5 537 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 OR8H3Q8N146 312 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 SSMEM1Q8WWF3 244 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 SYN2Q92777 582 aaPredicted RBP5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 SCRN2Q96FV2 425 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 FEVQ99581 238 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 VN1R1Q9GZP7 353 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 GRPEL1Q9HAV7 217 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 GTF3C4Q9UKN8 822 aa5.1□□□□□ -1.59
CKS1BP1-201ENST00000555221 CCDC180Q9P1Z9 1646 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A1W2PRB8 838 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 NEMP2A6NFY4 417 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 SMTNL1A8MU46 457 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 PSMA7O14818 248 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 RNASEH1O60930 286 aaKnown RBP5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 ACP2P11117 423 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 CETPP11597 493 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 PSMA3P25788 255 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 CDC25CP30307 473 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 CAPZA1P52907 286 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 DVL1P1P54792 670 aaPredicted RBP5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 POU3F1Q03052 451 aaPredicted RBP5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 MBTD1Q05BQ5 628 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 C6orf136Q5SQH8 315 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF852Q6ZMS4 543 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 C11orf57Q6ZUT1 292 aaPredicted RBP5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 TLK2Q86UE8 772 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 CRYBG2Q8N1P7 616 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 POC1AQ8NBT0 407 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 DHX58Q96C10 678 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 C17orf77Q96MU5 243 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 CPNE1Q99829 537 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 MYNNQ9NPC7 610 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 SERINC1Q9NRX5 453 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 MRGBPQ9NV56 204 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 TBC1D7Q9P0N9 293 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 B3GAT1Q9P2W7 334 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 RASAL2Q9UJF2 1139 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A087WV48 116 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 C16orf97H3BN30 126 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CAPN9O14815 690 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 WDPCPO95876 746 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 IGHV2-70P01814 119 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 SAGP10523 405 aaPredicted RBP5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 TGFB3P10600 412 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CCKARP32238 428 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 LHX1P48742 406 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 BMXP51813 675 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 THOP1P52888 689 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 PDX1P52945 283 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 CX3CL1P78423 397 aa5.08□□□□□ -1.6
CKS1BP1-201ENST00000555221 SCN1BQ07699 218 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms