RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 LYSMD4Q5XG99 296 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 CLYBLQ8N0X4 340 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TMEM145Q8NBT3 493 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 BLOC1S5Q8TDH9 187 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 SGF29Q96ES7 293 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 SLC25A23Q9BV35 468 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ERVK-6Q9BXR3 956 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 GSTO2Q9H4Y5 243 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TFB2MQ9H5Q4 396 aaKnown RBP17.04■□□□□ 0.32
SHOX-204ENST00000554971 SYTL2Q9HCH5 934 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 CA5BQ9Y2D0 317 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ZNF711Q9Y462 761 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TDRD6O60522 2096 aaKnown RBP17.04■□□□□ 0.32
SHOX-204ENST00000554971 TRIM38O00635 465 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 RECQL5O94762 991 aaPredicted RBP17.04■□□□□ 0.32
SHOX-204ENST00000554971 RHOBTB1O94844 696 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 PAX7P23759 505 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ARSDP51689 593 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 STC1P52823 247 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 PGGT1BP53609 377 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 NHLH1Q02575 133 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 PEX6Q13608 980 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 PTK2BQ14289 1009 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 AGERQ15109 404 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TRIP10Q15642 601 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TYSND1Q2T9J0 566 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ZNF678Q5SXM1 525 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TMEM198Q66K66 360 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 Q6ZVL8 140 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 TTC30BQ8N4P2 665 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ICA1LQ8NDH6 482 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ADCY4Q8NFM4 1077 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 MOCOSQ96EN8 888 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 MYOCQ99972 504 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 IRF2BPLQ9H1B7 796 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 Q9H521 79 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 ZFYVE1Q9HBF4 777 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 PILRBQ9UKJ0 227 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 H0Y8X5 98 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 PSMD12O00232 456 aaPredicted RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 CAPNS1P04632 268 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 JUNP05412 331 aaKnown RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 ZNF30P17039 623 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 CD27P26842 260 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 THOP1P52888 689 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 TRAP1Q12931 704 aaKnown RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 PEAR1Q5VY43 1037 aaPredicted RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 OR4L1Q8NH43 312 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 TBATAQ96M53 351 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 MBNL1Q9NR56 388 aaKnown RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 SUCOQ9UBS9 1254 aaKnown RBP17.03■□□□□ 0.32
SHOX-204ENST00000554971 ARL5AQ9Y689 179 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 PLXNB3Q9ULL4 1909 aa17.03■□□□□ 0.32
SHOX-204ENST00000554971 PCDH15Q96QU1 1955 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 NEMP2A6NFY4 417 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 PSMD11O00231 422 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 GOT2P00505 430 aaKnown RBP17.02■□□□□ 0.32
SHOX-204ENST00000554971 SLC4A1P02730 911 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 CD1DP15813 335 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 VCLP18206 1134 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 CD9P21926 228 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 HMGCLP35914 325 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 HSPA13P48723 471 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 CDKN2DP55273 166 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 CEACAM7Q14002 265 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 ARHGEF7Q14155 803 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 PTPRCAPQ14761 206 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 WSCD2Q2TBF2 565 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 SETMARQ53H47 684 aaPredicted RBP17.02■□□□□ 0.32
SHOX-204ENST00000554971 LAYNQ6UX15 382 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 TP53I13Q8NBR0 393 aaPredicted RBP17.02■□□□□ 0.32
SHOX-204ENST00000554971 ASB9Q96DX5 294 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 DTD2Q96FN9 168 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 PPP1R36Q96LQ0 422 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 LRGUKQ96M69 825 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 SLC6A18Q96N87 628 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 CATSPERZQ9NTU4 200 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 NLE1Q9NVX2 485 aaPredicted RBP17.02■□□□□ 0.32
SHOX-204ENST00000554971 CD84Q9UIB8 345 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 TMCO1Q9UM00 188 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 KCTD3Q9Y597 815 aa17.02■□□□□ 0.32
SHOX-204ENST00000554971 POM121BA6NF01 834 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 BBIP1A8MTZ0 92 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 K7ESM1 405 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 ACOT8O14734 319 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 PFDN6O15212 129 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 DENRO43583 198 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 VPS4BO75351 444 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 SORBS2O94875 1100 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 SNRPB2P08579 225 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 ENO3P13929 434 aaPredicted RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 NFKBIAP25963 317 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 ATP6V0D1P61421 351 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 ACOX1Q15067 660 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 IRAK1BP1Q5VVH5 260 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.31
SHOX-204ENST00000554971 RGL4Q8IZJ4 473 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms