RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 COPS4Q9BT78 406 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 NOL6Q9H6R4 1146 aaKnown RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 MAGEE1Q9HCI5 957 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 AMBNQ9NP70 447 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 AGPAT4Q9NRZ5 378 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 FAIMQ9NVQ4 179 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CRNNQ9UBG3 495 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 CARNS1A5YM72 827 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 MOXD2PA6NHM9 499 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 LRRC14BA6NHZ5 514 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ZNF99A8MXY4 864 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 NT5C1B-RDH14C9J2C7 533 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 FXYD1O00168 92 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ARNTLO00327 626 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PPP6CO00743 305 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 FBP2O00757 339 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 SCAMP3O14828 347 aaKnown RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 PER2O15055 1255 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 AIREO43918 545 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 NBNO60934 754 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 LRATO95237 230 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PSMA1P25786 263 aaKnown RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 PTX3P26022 381 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 HPCAL1P37235 193 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 SPAM1P38567 509 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 SMIM11AP58511 58 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 RAB39AQ14964 217 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CCDC85BQ15834 202 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 LDLRAP1Q5SW96 308 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CPTPQ5TA50 214 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ANXA8L1Q5VT79 327 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CES4AQ5XG92 561 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CASP12Q6UXS9 341 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ALKAL1Q6UXT8 129 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ADCK2Q7Z695 626 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 CARM1Q86X55 608 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 OR8H2Q8N162 312 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PIK3C3Q8NEB9 887 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 OR13J1Q8NGT2 312 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 NELL1Q92832 810 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 FUBP1Q96AE4 644 aaKnown RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 TMEM125Q96AQ2 219 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PTERQ96BW5 349 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 REPS1Q96D71 796 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 C3orf30Q96M34 536 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PAAF1Q9BRP4 392 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 HTATIP2Q9BUP3 242 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 SLC29A3Q9BZD2 475 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ATG10Q9H0Y0 220 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 TOR3AQ9H497 397 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 SLC32A1Q9H598 525 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 ARMC7Q9H6L4 198 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 IGSF5Q9NSI5 407 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 PDP1Q9P0J1 537 aaPredicted RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 MAP10Q9P2G4 905 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 RAB23Q9ULC3 237 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 GPR45Q9Y5Y3 372 aa3.83□□□□□ -1.8
KTN1-217ENST00000554831 TNRC6CQ9HCJ0 1690 aaKnown RBP3.83□□□□□ -1.8
KTN1-217ENST00000554831 CDK5RAP2Q96SN8 1893 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 LINC00854A0A1B0GVQ3 168 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 LOC285095A0A1B0GVY8 99 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 CENPXA8MT69 81 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 A8MX80 341 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 CACNG3O60359 315 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 DFNA5O60443 496 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 PRMT3O60678 531 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 LRG1P02750 347 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 IMPDH2P12268 514 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 KCNC1P48547 511 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 AFF1P51825 1210 aaKnown RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 CDKN2DP55273 166 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 STARD3Q14849 445 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 NPTX1Q15818 432 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 SYT16Q17RD7 645 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 ZC3H12BQ5HYM0 836 aaKnown RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 ATG9BQ674R7 924 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 FAM117BQ6P1L5 589 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 SNX20Q7Z614 316 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 RASAL3Q86YV0 1011 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 GPR150Q8NGU9 434 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 ARRDC2Q8TBH0 407 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 C2orf15Q8WU43 125 aaKnown RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 B3GALT6Q96L58 329 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 VPS35Q96QK1 796 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 REXO4Q9GZR2 422 aaKnown RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 SOX17Q9H6I2 414 aaPredicted RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 H2AFY2Q9P0M6 372 aaPredicted RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 ST14Q9Y5Y6 855 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 DGKBQ9Y6T7 804 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 TRIP11Q15643 1979 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 CNOT1A5YKK6 2376 aaKnown RBP3.82□□□□□ -1.8
KTN1-217ENST00000554831 MCM3APO60318 1980 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 LOC100130705A0A1B0GUX0 176 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 SOCS2O14508 198 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 TOR1BO14657 336 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 VILLO15195 856 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 TBL1XO60907 577 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 SH3BGRLO75368 114 aa3.82□□□□□ -1.8
KTN1-217ENST00000554831 EEDO75530 441 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms