RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PKP2Q99959 881 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 TRIM54Q9BYV2 358 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 CEP41Q9BYV8 373 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 SHCBP1LQ9BZQ2 653 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 NRSN2Q9GZP1 204 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 ADA2Q9NZK5 511 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 ABCD2Q9UBJ2 740 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 RSL24D1Q9UHA3 163 aaKnown RBP10.95□□□□□ -0.66
SRP54-205ENST00000554803 HCN2Q9UL51 889 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 CPQQ9Y646 472 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 BOD1L1Q8NFC6 3051 aa10.95□□□□□ -0.66
SRP54-205ENST00000554803 E2F8A0AVK6 867 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 A8MT66 165 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 H3BNH8 94 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 CFLARO15519 480 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TRMUO75648 421 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 ZMPSTE24O75844 475 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 WISP3O95389 354 aaPredicted RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 KLKB1P03952 638 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 JUPP14923 745 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 OGNP20774 298 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 PSMA4P25789 261 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 GABRB3P28472 473 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 CD6P30203 668 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 SERPINH1P50454 418 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 SUOXP51687 545 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 NME5P56597 212 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TAS2R39P59534 338 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 MS4A2Q01362 244 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 ACVR1Q04771 509 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TSTD2Q5T7W7 516 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 LCN8Q6JVE9 175 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 OGFOD2Q6N063 350 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 SPATA19Q7Z5L4 167 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 C14orf80Q86SX3 495 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 ZNF354CQ86Y25 554 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 GALNT13Q8IUC8 556 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 ARHGAP12Q8IWW6 846 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 SPACA3Q8IXA5 215 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 ETFBKMTQ8IXQ9 262 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 LILRA2Q8N149 483 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 UMODL1-AS1Q8N2C9 162 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 AADATQ8N5Z0 425 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TRIML2Q8N7C3 387 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 RTL3Q8N8U3 475 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 HEXDCQ8WVB3 486 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 NXNL1Q96CM4 212 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TMA16Q96EY4 203 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 FEM1CQ96JP0 617 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 CNBD2Q96M20 576 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 PRPF18Q99633 342 aaKnown RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 FICDQ9BVA6 458 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 SIK2Q9H0K1 926 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 MIR1-1HGQ9H1L0 117 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 WSB2Q9NYS7 404 aaPredicted RBP10.94□□□□□ -0.66
SRP54-205ENST00000554803 UBAP1Q9NZ09 502 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TMEM9Q9P0T7 183 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 NEU3Q9UQ49 428 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 TRAF6Q9Y4K3 522 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 HS3ST4Q9Y661 456 aa10.94□□□□□ -0.66
SRP54-205ENST00000554803 BSNQ9UPA5 3926 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 IFRD1O00458 451 aaPredicted RBP10.93□□□□□ -0.66
SRP54-205ENST00000554803 PFDN6O15212 129 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 BCAT2O15382 392 aaPredicted RBP10.93□□□□□ -0.66
SRP54-205ENST00000554803 GREM1O60565 184 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 SNAP91O60641 907 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 RNASEH2AO75792 299 aaKnown RBP10.93□□□□□ -0.66
SRP54-205ENST00000554803 IDO1P14902 403 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 RHOQP17081 205 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 CDH2P19022 906 aaPredicted RBP10.93□□□□□ -0.66
SRP54-205ENST00000554803 CD9P21926 228 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 ARNTP27540 789 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 SLC6A4P31645 630 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 HERVK_113P63132 956 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 LY6DQ14210 128 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 MTX3Q5HYI7 312 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 COLEC12Q5KU26 742 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 LY6G5CQ5SRR4 150 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 TMTC4Q5T4D3 741 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 RAP1GAP2Q684P5 730 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 MRNIPQ6NTE8 343 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 LARP4Q71RC2 724 aaKnown RBP eCLIP10.93□□□□□ -0.66
SRP54-205ENST00000554803 DENND1CQ8IV53 801 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 ZNF683Q8IZ20 524 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 MIER2Q8N344 545 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 ATP6V0D2Q8N8Y2 350 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 NETO2Q8NC67 525 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 IPMKQ8NFU5 416 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 CADM4Q8NFZ8 388 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 PLD4Q96BZ4 506 aa10.93□□□□□ -0.66
SRP54-205ENST00000554803 IMP4Q96G21 291 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms