RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 EXOSC8Q96B26 276 aaKnown RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 OR52B2Q96RD2 323 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PHPT1Q9NRX4 125 aaPredicted RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 MLXQ9UH92 298 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 A0A1W2PQ72 361 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 APOC1P02654 83 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM44Q2T9K0 475 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TIFABQ6ZNK6 161 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 GALNTL5Q7Z4T8 443 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 JAZF1Q86VZ6 243 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TMC8Q8IU68 726 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 RELL1Q8IUW5 271 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 A8MT66 165 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ORC5O43913 435 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 C8BP07358 591 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CKMT2P17540 419 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ATP13A5Q4VNC0 1218 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM110Q86TL2 294 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 OR10H5Q8NGA6 315 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CANT1Q8WVQ1 401 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 KAT2AQ92830 837 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■□□□□ 9.3
VTI1B-204ENST00000554659 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 K7EPI3 171 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TOR1BO14657 336 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CAPN15O75808 1086 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ITPKBP27987 946 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 KIAA1324Q6UXG2 1013 aaKnown RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ZIM2Q9NZV7 527 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 SLC17A6Q9P2U8 582 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 OAZ3Q9UMX2 235 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 PGLSO95336 258 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CYP11A1P05108 521 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CCL23P55773 120 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 SLC25A11Q02978 314 aaKnown RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 HEPACAMQ14CZ8 416 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 C9orf43Q8TAL5 461 aaPredicted RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 POF1BQ8WVV4 589 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CLCC1Q96S66 551 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 MTRRQ9UBK8 725 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 LRRC42Q9Y546 428 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 POP4O95707 220 aaKnown RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CCNFP41002 786 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TCEAL1Q15170 157 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 KLHL22Q53GT1 634 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 DNAJB7Q7Z6W7 309 aaPredicted RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 PDSS2Q86YH6 399 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 CHST4Q8NCG5 386 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 C11orf16Q9NQ32 467 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 TMLHEQ9NVH6 421 aa13.72□□□□□ -0.21
VTI1B-204ENST00000554659 POLR3BQ9NW08 1133 aaPredicted RBP13.72□□□□□ -0.21
VTI1B-204ENST00000554659 REM1O75628 298 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 GRIA1P42261 906 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 SF1Q15637 639 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 ANKRD23Q86SG2 305 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 UFD1Q92890 307 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 FATE1Q969F0 183 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 DUSP26Q9BV47 211 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 CDADC1Q9BWV3 514 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 ANKRA2Q9H9E1 313 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 MID1O15344 667 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 GLUD1P00367 558 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 DNTTP04053 509 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 CTNNB1P35222 781 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 YAP1P46937 504 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 MVKQ03426 396 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 SOWAHAQ2M3V2 549 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 TXNRD3NBQ6F5E7 133 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 MTMR14Q8NCE2 650 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 RNF31Q96EP0 1072 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 KCNS3Q9BQ31 491 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 NEMP2A6NFY4 417 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 OR2AG2A6NM03 316 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 IRAK2O43187 625 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 STBD1O95210 358 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 PRLP01236 227 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 PRNPP04156 253 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF806P0C7X5 589 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 MOB2Q70IA6 237 aa13.71□□□□□ -0.21
VTI1B-204ENST00000554659 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
VTI1B-204ENST00000554659 OR8H3Q8N146 312 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms