RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 HOXA9P31269 272 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MATKP42679 507 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ALDH3B2P48448 385 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 NDST1P52848 882 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ADARP55265 1226 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MBTD1Q05BQ5 628 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 FOXM1Q08050 763 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 DSC1Q08554 894 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PPIDQ08752 370 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SCAPQ12770 1279 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 BNIP2Q12982 314 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MPP3Q13368 585 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PTK2BQ14289 1009 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ARL13BQ3SXY8 428 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SLC25A52Q3SY17 297 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 NADK2Q4G0N4 442 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PPP6R3Q5H9R7 873 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TCHHL1Q5QJ38 904 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 INTS11Q5TA45 600 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 NCBP2-AS2Q69YL0 99 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 LILRA6Q6PI73 481 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF852Q6ZMS4 543 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ZCCHC23Q6ZST2 131 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 KIAA0408Q6ZU52 694 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SPATA31D4Q6ZUB0 917 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TPRG1Q6ZUI0 275 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 RFX8Q6ZV50 586 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TAS1R1Q7RTX1 841 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MAVSQ7Z434 540 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 STRA8Q7Z7C7 330 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 GALNT7Q86SF2 657 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CARM1Q86X55 608 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SNX32Q86XE0 403 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CAMK1DQ8IU85 385 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SLC22A9Q8IVM8 553 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CNTN4Q8IWV2 1026 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 AQP12AQ8IXF9 295 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SLC25A41Q8N5S1 370 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ANKFN1Q8N957 763 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PCYOX1LQ8NBM8 494 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TSPEARQ8WU66 669 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 STYXQ8WUJ0 223 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ZUFSPQ96AP4 578 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TNIP3Q96KP6 325 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 LENG8Q96PV6 779 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 GCNAQ96QF7 691 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CDRT15Q96T59 188 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CCT7Q99832 543 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 HOPXQ9BPY8 73 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 DDX50Q9BQ39 737 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 RPP25Q9BUL9 199 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ACE2Q9BYF1 805 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 C20orf27Q9GZN8 174 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 DHX35Q9H5Z1 703 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CLK4Q9HAZ1 481 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 SPAG4Q9NPE6 437 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CASS4Q9NQ75 786 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PFDN4Q9NQP4 134 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TBC1D23Q9NUY8 699 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 PNPOQ9NVS9 261 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 ARMC1Q9NVT9 282 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 DPP3Q9NY33 737 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 UBAP1Q9NZ09 502 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 CLIC5Q9NZA1 410 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM216Q9P0N5 145 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 FBXW11Q9UKB1 542 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 VANGL2Q9ULK5 521 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 FAF1Q9UNN5 650 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 AAR2Q9Y312 384 aaKnown RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 MTF2Q9Y483 593 aaPredicted RBP5.86□□□□□ -1.47
VPS33B-203ENST00000554264 GPR179Q6PRD1 2367 aa5.86□□□□□ -1.47
VPS33B-203ENST00000554264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 SH3PXD2BA1X283 911 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CCDC162PA2VCL2 907 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ARL5CA6NH57 179 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 LACTBL1A8MY62 500 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 E9PBE3 544 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 H3BNH8 94 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ACOT8O14734 319 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 AIM2O14862 343 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 PRICKLE3O43900 615 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 SNAP91O60641 907 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 VPS4BO75351 444 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ECI2O75521 394 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 LYPLA1O75608 230 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ANXA9O76027 345 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 VAPBO95292 243 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 F9P00740 461 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 C2P06681 752 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 RBP1P09455 135 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 UMPSP11172 480 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 ATP5F1P24539 256 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 MGAT1P26572 445 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 AXLP30530 894 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 HOXA11P31270 313 aaPredicted RBP5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CSRP3P50461 194 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 CCR3P51677 355 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 INHBCP55103 352 aa5.85□□□□□ -1.47
VPS33B-203ENST00000554264 NME5P56597 212 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms