RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 TRPV2Q9Y5S1 764 aa11.9□□□□□ -0.5
SPTB-206ENST00000553938 MYO7AQ13402 2215 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 CHD5Q8TDI0 1954 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 PSMD3O43242 534 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 HOXC11O43248 304 aaPredicted RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 SNAP91O60641 907 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 RPP40O75818 363 aaKnown RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 HOXD9P28356 352 aaPredicted RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 KPNA2P52292 529 aaKnown RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 FAM189BP81408 668 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 SLC14A1Q13336 389 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 ZNF235Q14590 738 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 OXA1LQ15070 435 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 SF1Q15637 639 aaKnown RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.51
SPTB-206ENST00000553938 PXDC1Q5TGL8 231 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 ABRAXAS1Q6UWZ7 409 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 LGI2Q8N0V4 545 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 CLEC4FQ8N1N0 589 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 AFAP1L2Q8N4X5 818 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 TMEM199Q8N511 208 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 SH3KBP1Q96B97 665 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 CCDC126Q96EE4 140 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 MAP6Q96JE9 813 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 CD274Q9NZQ7 290 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 MAFFQ9ULX9 164 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.51
SPTB-206ENST00000553938 ILVBLA1L0T0 632 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 SNPHO15079 494 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 GJB5O95377 273 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 RPS17P08708 135 aaKnown RBP11.89□□□□□ -0.51
SPTB-206ENST00000553938 CTAG1AP78358 180 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MORN1Q5T089 497 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 GLT6D1Q7Z4J2 308 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 ANKRD13BQ86YJ7 626 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 ZUFSPQ96AP4 578 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SPTB-206ENST00000553938 AP5M1Q9H0R1 490 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 AQP12BA6NM10 295 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 KERAO60938 352 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 VNN2O95498 520 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 LDLRP01130 860 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 FGF4P08620 206 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MTHFRP42898 656 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MAP2K4P45985 399 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 HNRNPFP52597 415 aaKnown RBP11.89□□□□□ -0.51
SPTB-206ENST00000553938 PLA2G16P53816 162 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 ARSFP54793 590 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 NFKB2Q00653 900 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 IFITM3Q01628 133 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 IL1RL1Q01638 556 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 ZRANB3Q5FWF4 1079 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 HACD2Q6Y1H2 254 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 METTL23Q86XA0 190 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 AQP12AQ8IXF9 295 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MSRB3Q8IXL7 192 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 CD200R1Q8TD46 325 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MBOAT4Q96T53 435 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 C9orf16Q9BUW7 83 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 HOXD1Q9GZZ0 328 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 TMEM248Q9NWD8 314 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 ELOVL2Q9NXB9 296 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 MARCH2Q9P0N8 246 aa11.89□□□□□ -0.51
SPTB-206ENST00000553938 AREL1O15033 823 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 SNX2O60749 519 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 IRF1P10914 325 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 HTR1BP28222 390 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 OPRL1P41146 370 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 HSPA7P48741 367 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 HSD17B7P56937 341 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 ZXDBP98169 803 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 EIF2B5Q13144 721 aaKnown RBP11.88□□□□□ -0.51
SPTB-206ENST00000553938 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 XKR7Q5GH72 579 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 CLLU1OSQ5K130 101 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 SPESP1Q6UW49 350 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 USP51Q70EK9 711 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 GALNT13Q8IUC8 556 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 KIAA1191Q96A73 305 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 ISG20Q96AZ6 181 aaKnown RBP11.88□□□□□ -0.51
SPTB-206ENST00000553938 TRIB3Q96RU7 358 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
SPTB-206ENST00000553938 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
SPTB-206ENST00000553938 TLR6Q9Y2C9 796 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 K7ERQ8 282 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 M0QZQ0 153 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 CBX4O00257 560 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 SH3BGRLO75368 114 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 PRR35P0CG20 571 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 DCKP27707 260 aa11.88□□□□□ -0.51
SPTB-206ENST00000553938 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms