RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMPRSS11EQ9UL52 423 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 ZFR2Q9UPR6 939 aaKnown RBP14.19□□□□□ -0.14
SHMT2-208ENST00000553868 MAN2B2Q9Y2E5 1009 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 DHRS7Q9Y394 339 aa14.19□□□□□ -0.14
SHMT2-208ENST00000553868 EIF3FO00303 357 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 VILLO15195 856 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 INPP4BO15327 924 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 DFNA5O60443 496 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 WISP3O95389 354 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 SEMA4FO95754 770 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 PROCP04070 461 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 PCCBP05166 539 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 GSTM1P09488 218 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 DHRS4L1P0CG22 281 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CKMT2P17540 419 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 DGKAP23743 735 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CA5AP35218 305 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 NUDT1P36639 197 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 SERPINB4P48594 390 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 GSTM4Q03013 218 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 TMEM115Q12893 351 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 ILKQ13418 452 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CSHL1Q14406 222 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 ZNF460Q14592 562 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 ACAP2Q15057 778 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CCDC81Q6ZN84 652 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 OTOAQ7RTW8 1153 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CENPLQ8N0S6 344 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CLDN19Q8N6F1 224 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 ARMC2Q8NEN0 867 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CD200R1Q8TD46 325 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 CKAP2Q8WWK9 683 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 MAGEB18Q96M61 343 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 PSMG3-AS1Q96PY0 264 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 MRPL57Q9BQC6 102 aaKnown RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 DERL2Q9GZP9 239 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 MRPL46Q9H2W6 279 aaKnown RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 TRIM39Q9HCM9 518 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 MLXIPLQ9NP71 852 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 SARS2Q9NP81 518 aaKnown RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 LATS2Q9NRM7 1088 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 PHPT1Q9NRX4 125 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 TMEM216Q9P0N5 145 aa14.18□□□□□ -0.14
SHMT2-208ENST00000553868 SPTBN1Q01082 2364 aaKnown RBP14.18□□□□□ -0.14
SHMT2-208ENST00000553868 ICE1Q9Y2F5 2266 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 GPR89AB7ZAQ6 455 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 SHOX2O60902 331 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 DXOO77932 396 aaKnown RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PAK4O96013 591 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 SOD1P00441 154 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 GPR89BP0CG08 455 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 CBSLP0DN79 551 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 ENO3P13929 434 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 CPA3P15088 417 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 TAC1P20366 129 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 EPHA8P29322 1005 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 LSP1P33241 339 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 CBSP35520 551 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 CLCN7P51798 805 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PRKAA2P54646 552 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 ERVPABLB-1P60509 514 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 B4GALNT1Q00973 533 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 TIAL1Q01085 375 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PPARDQ03181 441 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 ASPHQ12797 758 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PDK4Q16654 411 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 C16orf46Q6P387 395 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PAQR3Q6TCH7 311 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 HEATR4Q86WZ0 1026 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PLD6Q8N2A8 252 aaKnown RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 ZBTB2Q8N680 514 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 SIDT2Q8NBJ9 832 aaKnown RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 TP53I13Q8NBR0 393 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 RAB3IL1Q8TBN0 382 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 LRRC8CQ8TDW0 803 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 EXTL1Q92935 676 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 NXNL1Q96CM4 212 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 LENG8Q96PV6 779 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 WDR26Q9H7D7 661 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PSD3Q9NYI0 1048 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 CNOT6Q9ULM6 557 aaKnown RBP14.17□□□□□ -0.14
SHMT2-208ENST00000553868 MED16Q9Y2X0 877 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 PRSS21Q9Y6M0 314 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 C2CD3Q4AC94 2353 aa14.17□□□□□ -0.14
SHMT2-208ENST00000553868 BLACEA4D250 179 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 IQCF5A8MTL0 148 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
SHMT2-208ENST00000553868 MTX2O75431 263 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 CDK14O94921 469 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 IGHV4-34P06331 123 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 BPGMP07738 259 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 FAM87AP0C7U9 286 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 MYL2P10916 166 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 CCR5P51681 352 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 CDK3Q00526 305 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 IRF4Q15306 451 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 BCL7AQ4VC05 210 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 TTC19Q6DKK2 380 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-208ENST00000553868 DET1Q7L5Y6 550 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms