RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ANKRD22Q5VYY1 191 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 KIAA0930Q6ICG6 404 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 CYB5D1Q6P9G0 228 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 TTC23LQ6PF05 361 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 C11orf96Q7Z7L8 435 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF761Q86XN6 746 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 MARCH9Q86YJ5 346 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 JAMLQ86YT9 394 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 SFTPA2Q8IWL1 248 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 LMNTD2Q8IXW0 634 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 CLDN19Q8N6F1 224 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 NAT8LQ8N9F0 302 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 OR4D9Q8NGE8 314 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 MDM1Q8TC05 714 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ZFPM2Q8WW38 1151 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 STAMBPL1Q96FJ0 436 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ZDHHC12Q96GR4 267 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 SNF8Q96H20 258 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ZNF578Q96N58 590 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 SERPINB12Q96P63 405 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 TRIM31Q9BZY9 425 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 WWP1Q9H0M0 922 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 COG4Q9H9E3 785 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 RDH14Q9HBH5 336 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 UTP11Q9Y3A2 253 aaKnown RBP8.15□□□□□ -1.1
PSEN1-209ENST00000553855 LOXL2Q9Y4K0 774 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 PCDHB1Q9Y5F3 818 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 ENTPD2Q9Y5L3 495 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 SPTBN2O15020 2390 aa8.15□□□□□ -1.1
PSEN1-209ENST00000553855 CHD6Q8TD26 2715 aa8.15□□□□□ -1.11
PSEN1-209ENST00000553855 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 E5RI56 91 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PLD2O14939 933 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 HGSO14964 777 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TTI1O43156 1089 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 BRINP1O60477 761 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 AVILO75366 819 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 RASSF9O75901 435 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 USP1O94782 785 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TMEM63AO94886 807 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TNFSF15O95150 251 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PF4P02776 101 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PRSS56P0CW18 603 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TYRP1P17643 537 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PGAM1P18669 254 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CHRM3P20309 590 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 OGNP20774 298 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CD1CP29017 333 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CA5AP35218 305 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CD151P48509 253 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 LIMK2P53671 638 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 MAPK10P53779 464 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 UBE2IP63279 158 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 SQSTM1Q13501 440 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TUBB2AQ13885 445 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 LONRF1Q17RB8 773 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 BBS9Q3SYG4 887 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 ANKRD20A4Q4UJ75 823 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 RNASEH2BQ5TBB1 312 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 WDR74Q6RFH5 385 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CES3Q6UWW8 571 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 OTOAQ7RTW8 1153 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CAND1Q86VP6 1230 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 OOSP2Q86WS3 158 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 RAB42Q8N4Z0 105 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 SPATA4Q8NEY3 305 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 SKA2Q8WVK7 121 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 ASZ1Q8WWH4 475 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 FGF11Q92914 225 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF837Q96EG3 531 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 MFSD3Q96ES6 412 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 FOPNLQ96NB1 174 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 NUDT22Q9BRQ3 303 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 FAM167BQ9BTA0 163 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 CARD6Q9BX69 1037 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TBC1D10AQ9BXI6 508 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 RAB17Q9H0T7 212 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 MVB12BQ9H7P6 319 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PPANQ9NQ55 473 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 TREX1Q9NSU2 369 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 C20orf96Q9NUD7 363 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 INTS10Q9NVR2 710 aaKnown RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF624Q9P2J8 865 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-209ENST00000553855 DKK4Q9UBT3 224 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 PISDQ9UG56 409 aa8.14□□□□□ -1.11
PSEN1-209ENST00000553855 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms