RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 INTS9Q9NV88 658 aaKnown RBP13.78□□□□□ -0.2
PRKCH-206ENST00000553830 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
PRKCH-206ENST00000553830 PLAGL1Q9UM63 463 aa13.78□□□□□ -0.2
PRKCH-206ENST00000553830 PRAMEF33A0A0G2JMD5 474 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 AQP9O43315 295 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 SMIM24O75264 130 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PIAS2O75928 621 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 SBK3P0C264 359 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 CPA3P15088 417 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 TAC1P20366 129 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 CYP2A7P20853 494 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 KCNA4P22459 653 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ACADLP28330 430 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
PRKCH-206ENST00000553830 BNIP3Q12983 259 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PCM1Q15154 2024 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ELOCQ15369 112 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 RPE65Q16518 533 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 HLA-BQ31612 363 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 CCSMST1Q4G0I0 132 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-206ENST00000553830 SBSNQ6UWP8 590 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 LCA5Q86VQ0 697 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PATE1Q8WXA2 126 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 JPH3Q8WXH2 748 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ASB11Q8WXH4 323 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ELF4Q99607 663 aaPredicted RBP13.77□□□□□ -0.21
PRKCH-206ENST00000553830 TRIM54Q9BYV2 358 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 CNOT10Q9H9A5 744 aaKnown RBP13.77□□□□□ -0.21
PRKCH-206ENST00000553830 IL21RQ9HBE5 538 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 ABCF3Q9NUQ8 709 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 FAM53CQ9NYF3 392 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 SLC6A14Q9UN76 642 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PDE10AQ9Y233 779 aa13.77□□□□□ -0.21
PRKCH-206ENST00000553830 PRR19A6NJB7 356 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 SYCE1LA8MT33 242 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 G3V2L1 256 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 DLL1O00548 723 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 DLX3O60479 287 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PSIP1O75475 530 aaKnown RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 MATN4O95460 622 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 C1orf105O95561 183 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ANXA6P08133 673 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ALDH3A1P30838 453 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 HOXD12P35452 270 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 SERPINB4P48594 390 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ARRB1P49407 418 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 SP140Q13342 867 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PCLAFQ15004 111 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PFKFB4Q16877 469 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 LAIR1Q6GTX8 287 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 CAPRIN2Q6IMN6 1127 aaKnown RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ZYG11AQ6WRX3 759 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 C10orf107Q8IVU9 208 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 TRIM48Q8IWZ4 208 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 FBXO39Q8N4B4 442 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PTGR2Q8N8N7 351 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 LMNTD1Q8N9Z9 388 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PPP1R14CQ8TAE6 165 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 MCOLN3Q8TDD5 553 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ZDHHC1Q8WTX9 485 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 LOXL4Q96JB6 756 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
PRKCH-206ENST00000553830 GAREM1Q9H706 876 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 PARVBQ9HBI1 364 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 ARL15Q9NXU5 204 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 WWOXQ9NZC7 414 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 NUDT4Q9NZJ9 180 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 OARD1Q9Y530 152 aa13.76□□□□□ -0.21
PRKCH-206ENST00000553830 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
PRKCH-206ENST00000553830 SLC16A5O15375 505 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 HIST1H2AGP0C0S8 130 aaPredicted RBP13.75□□□□□ -0.21
PRKCH-206ENST00000553830 TPBGLP0DKB5 382 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
PRKCH-206ENST00000553830 F3P13726 295 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 HIST1H2ADP20671 130 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 ETV4P43268 484 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 RPIAP49247 311 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
PRKCH-206ENST00000553830 GUCY1A3Q02108 690 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 SHBQ15464 509 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 TGFBIQ15582 683 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 PPP1R3AQ16821 1122 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 TTC23LQ6PF05 361 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 SLC23A3Q6PIS1 610 aa13.75□□□□□ -0.21
PRKCH-206ENST00000553830 UNC5DQ6UXZ4 953 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms