RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ZFP69Q49AA0 526 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 FAM205BPQ63HN1 556 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 ZNF790Q6PG37 636 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 NUDT13Q86X67 352 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 CEP57Q86XR8 500 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 GUF1Q8N442 669 aaKnown RBP2.95□□□□□ -1.94
VRK1-202ENST00000553683 MAPK1IP1LQ8NDC0 245 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 MCUQ8NE86 351 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 OR1J1Q8NGS3 322 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 CCDC107Q8WV48 283 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 TMEM143Q96AN5 459 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 NSL1Q96IY1 281 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 ART5Q96L15 291 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 MAF1Q9H063 256 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 WDR13Q9H1Z4 485 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 PELI2Q9HAT8 420 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 HAUS2Q9NVX0 235 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 PTTG2Q9NZH5 202 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 RHCGQ9UBD6 479 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 VPS28Q9UK41 221 aa2.95□□□□□ -1.94
VRK1-202ENST00000553683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.95□□□□□ -1.949e-13■□□□□ 9.4
VRK1-202ENST00000553683 LOC101059948A0A1B0GTJ6 334 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 PLOD2O00469 737 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 GAPDHSO14556 408 aaPredicted RBP2.94□□□□□ -1.94
VRK1-202ENST00000553683 DCXO43602 365 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 ZFAND5O76080 213 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 WDPCPO95876 746 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 ACP2P11117 423 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 TYMPP19971 482 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 MAP2K2P36507 400 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 CASP2P42575 452 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 MAGEA11P43364 429 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 CDH11P55287 796 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 CUL4AQ13619 759 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 MEA1Q16626 185 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 GTDC1Q4AE62 458 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 ADAMTSL4-AS1Q5T5F5 129 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 CORO6Q6QEF8 472 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 METTL7BQ6UX53 244 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 MYPOPQ86VE0 399 aaPredicted RBP2.94□□□□□ -1.94
VRK1-202ENST00000553683 TRIML1Q8N9V2 468 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 ZNF485Q8NCK3 441 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 OR10S1Q8NGN2 331 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 HPSE2Q8WWQ2 592 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 ATL1Q8WXF7 558 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 DYRK2Q92630 601 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 POM121L2Q96KW2 1035 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 EGLN1Q9GZT9 426 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 LAT2Q9GZY6 243 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 UBA5Q9GZZ9 404 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 CCDC68Q9H2F9 335 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 INTS10Q9NVR2 710 aaKnown RBP2.94□□□□□ -1.94
VRK1-202ENST00000553683 STK26Q9P289 416 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 IL17BQ9UHF5 180 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 GRID1Q9ULK0 1009 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 TMEM5Q9Y2B1 443 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 TRIM17Q9Y577 477 aa2.94□□□□□ -1.94
VRK1-202ENST00000553683 PASKQ96RG2 1323 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 LOC102723996A0A087X1L8 192 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 GPR75-ASB3A0A0A6YYF3 556 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 A0A1B0GU03 582 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 ANKUB1A6NFN9 424 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 DNM1LO00429 736 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 SH3BP5O60239 455 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 OR10H2O60403 315 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 WDHD1O75717 1129 aaPredicted RBP2.93□□□□□ -1.94
VRK1-202ENST00000553683 DFFBO76075 338 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 RAF1P04049 648 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 HMBSP08397 361 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 OR2T7P0C7T2 308 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 CA4P22748 312 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 NRIP1P48552 1158 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 STAT2P52630 851 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 PDX1P52945 283 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 CDR2Q01850 454 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 GRAPQ13588 217 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 RILPL1Q5EBL4 403 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 FFAR4Q5NUL3 377 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 DCAF10Q5QP82 559 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 ITPRIPL1Q6GPH6 555 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 FIGLAQ6QHK4 219 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 SLC16A9Q7RTY1 509 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 ADIPOR2Q86V24 386 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 KBTBD6Q86V97 674 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 COMMD2Q86X83 199 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 TAGAPQ8N103 731 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 SCML4Q8N228 414 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 AFAP1Q8N556 730 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 MINDY1Q8N5J2 469 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 MAPKAPK5-AS1Q8N8E1 139 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 ZNF383Q8NA42 475 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 PRPF31Q8WWY3 499 aaKnown RBP2.93□□□□□ -1.94
VRK1-202ENST00000553683 ZNF622Q969S3 477 aaKnown RBP eCLIP2.93□□□□□ -1.94
VRK1-202ENST00000553683 DHX58Q96C10 678 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 RSRC1Q96IZ7 334 aaKnown RBP2.93□□□□□ -1.94
VRK1-202ENST00000553683 ZNF599Q96NL3 588 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 MS4A10Q96PG2 267 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 FNBP1Q96RU3 617 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms