RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ACANP16112 2415 aa13.3□□□□□ -0.28
PRPF39-204ENST00000553605 C17orf113A0A1B0GUU1 675 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 AURKAO14965 403 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A9O60656 530 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
PRPF39-204ENST00000553605 ALBP02768 609 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 POLBP06746 335 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A6P19224 532 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A1P22309 533 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A4P22310 534 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 ALAS2P22557 587 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 GABRA4P48169 554 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 RBBP7Q16576 425 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 NKG7Q16617 165 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 LONRF1Q17RB8 773 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 TCP11X2Q5H9J9 407 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 HOOK3Q86VS8 718 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
PRPF39-204ENST00000553605 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 OR2L2Q8NH16 312 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 FKBP10Q96AY3 582 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 RMDN2Q96LZ7 410 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 NRTNQ99748 197 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRPF39-204ENST00000553605 WDR54Q9H977 334 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A7Q9HAW7 530 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A10Q9HAW8 530 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 UGT1A8Q9HAW9 530 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 IL26Q9NPH9 171 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 SAMSN1Q9NSI8 373 aaKnown RBP13.29□□□□□ -0.28
PRPF39-204ENST00000553605 IRAK4Q9NWZ3 460 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 ACTR10Q9NZ32 417 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 PTGFRNQ9P2B2 879 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 FAM8A1Q9UBU6 413 aa13.29□□□□□ -0.28
PRPF39-204ENST00000553605 WISP2O76076 250 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 TMPRSS15P98073 1019 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 PAFAH1B3Q15102 231 aaKnown RBP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 SLC5A12Q1EHB4 618 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 TXNRD3NBQ6F5E7 133 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 SHISA6Q6ZSJ9 500 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 DET1Q7L5Y6 550 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 FAM20CQ8IXL6 584 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 DDHD1Q8NEL9 900 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 CCDC110Q8TBZ0 833 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 DTX3LQ8TDB6 740 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 SRPK1Q96SB4 655 aaKnown RBP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 SPSB2Q99619 263 aa13.28□□□□□ -0.28
PRPF39-204ENST00000553605 TFB2MQ9H5Q4 396 aaKnown RBP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-204ENST00000553605 KLHL33A6NCF5 533 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 GPR39O43194 453 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 PMPCBO75439 489 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 USP1O94782 785 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 HPP00738 406 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 F10P00742 488 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 FOSL1P15407 271 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 EEF1GP26641 437 aaKnown RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 HMGCLP35914 325 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 LTBQ06643 244 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 FOXD4Q12950 439 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 KRT81Q14533 505 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 ZIC1Q15915 447 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 PPP2R5EQ16537 467 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 PCSK7Q16549 785 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 GPRC6AQ5T6X5 926 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 NCBP2-AS2Q69YL0 99 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 SPESP1Q6UW49 350 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 NCCRP1Q6ZVX7 275 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 TMEM200AQ86VY9 491 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 AMIGO1Q86WK6 493 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 SPPL2CQ8IUH8 684 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 KBTBD2Q8IY47 623 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 ADGRF3Q8IZF5 1079 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CNTD1Q8N815 330 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 PSMF1Q92530 271 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 NRGNQ92686 78 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 MDFIQ99750 246 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CCM2Q9BSQ5 444 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CHRNA10Q9GZZ6 450 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 CBX8Q9HC52 389 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 ZNF160Q9HCG1 818 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 DLL4Q9NR61 685 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 ZNF835Q9Y2P0 537 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.29
PRPF39-204ENST00000553605 SPO11Q9Y5K1 396 aa13.27□□□□□ -0.29
PRPF39-204ENST00000553605 PRAMEF2O60811 474 aa13.26□□□□□ -0.29
PRPF39-204ENST00000553605 ONECUT2O95948 504 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms