RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 GPATCH11Q8N954 259 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 LCN9Q8WX39 176 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 VPS39Q96JC1 886 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 CD180Q99467 661 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 GPR21Q99679 349 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 RHOJQ9H4E5 214 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 TFB2MQ9H5Q4 396 aaKnown RBP12.97□□□□□ -0.33
ATL1-203ENST00000553509 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 EPHA6Q9UF33 1036 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 CEP295Q9C0D2 2601 aa12.97□□□□□ -0.33
ATL1-203ENST00000553509 IGHV5-10-1A0A0J9YXX1 117 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 TOX3O15405 576 aaPredicted RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 MPC1LP0DKB6 136 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 TYRP1P17643 537 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 GABRB3P28472 473 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 ECHS1P30084 290 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 GP5P40197 560 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 PDX1P52945 283 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 SLC12A2P55011 1212 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 GPX6P59796 221 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 PDAP1Q13442 181 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 ZC3HC1Q86WB0 502 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 VRK3Q8IV63 474 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 CTAGE3PQ8IX95 158 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 LSMEM2Q8N112 164 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 CARFQ8N187 725 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 SIDT2Q8NBJ9 832 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 PHC3Q8NDX5 983 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 OR5AR1Q8NGP9 310 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 CFAP61Q8NHU2 1237 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 WDR36Q8NI36 951 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 CD200R1Q8TD46 325 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.33
ATL1-203ENST00000553509 FAM136AQ96C01 138 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 NDNQ99608 321 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 CMKLR1Q99788 373 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 PDP2Q9P2J9 529 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 SLC17A6Q9P2U8 582 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 NFU1Q9UMS0 254 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 TDRKHQ9Y2W6 561 aaKnown RBP12.96□□□□□ -0.33
ATL1-203ENST00000553509 PSAT1Q9Y617 370 aa12.96□□□□□ -0.33
ATL1-203ENST00000553509 PRAMEF33A0A0G2JMD5 474 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 FAM95CA0A1B0GW59 222 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 OR5K3A6NET4 321 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 C9P02748 559 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 CATP04040 527 aaKnown RBP12.95□□□□□ -0.34
ATL1-203ENST00000553509 F7P08709 466 aaPredicted RBP12.95□□□□□ -0.34
ATL1-203ENST00000553509 ANKRD34CP0C6C1 535 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 THRAP10827 490 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
ATL1-203ENST00000553509 ABRQ12979 859 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 PRKG2Q13237 762 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 KYNUQ16719 465 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 KLHL38Q2WGJ6 581 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 KBTBD12Q3ZCT8 623 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 RBM20Q5T481 1227 aaKnown RBP12.95□□□□□ -0.34
ATL1-203ENST00000553509 HECTD2Q5U5R9 776 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 IRGCQ6NXR0 463 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 B3GNT8Q7Z7M8 397 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 AMIGO1Q86WK6 493 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 RSC1A1Q92681 617 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 RAD51AP1Q96B01 352 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 TSPAN17Q96FV3 270 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 ATXN7L3BQ96GX2 97 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 ELMO2Q96JJ3 720 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 CYTH2Q99418 400 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 CDC42EP4Q9H3Q1 356 aaKnown RBP12.95□□□□□ -0.34
ATL1-203ENST00000553509 POLR1BQ9H9Y6 1135 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 NINJ2Q9NZG7 142 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 MED16Q9Y2X0 877 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 VWA7Q9Y334 891 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 PCDHGA8Q9Y5G5 932 aa12.95□□□□□ -0.34
ATL1-203ENST00000553509 SPEGQ15772 3267 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 SNRNP200O75643 2136 aaKnown RBP12.94□□□□□ -0.34
ATL1-203ENST00000553509 OR6C74A6NCV1 312 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 TLCD2A6NGC4 264 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
ATL1-203ENST00000553509 MATN4O95460 622 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 FDXRP22570 491 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 MCM3P25205 808 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 TNFRSF8P28908 595 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
ATL1-203ENST00000553509 ABCG1P45844 678 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 LSSP48449 732 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 RAB28P51157 221 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 IL2P60568 153 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 POU4F1Q01851 419 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 CFHR1Q03591 330 aa12.94□□□□□ -0.34
ATL1-203ENST00000553509 CAMK2BQ13554 666 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms