RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 AMPD1P23109 780 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 MYBPHQ13203 477 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 RBBP7Q16576 425 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 FGD2Q7Z6J4 655 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 PHF13Q86YI8 300 aaPredicted RBP11.29□□□□□ -0.6
SNRPF-205ENST00000553192 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
SNRPF-205ENST00000553192 VPS35Q96QK1 796 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 POLDIP3Q9BY77 421 aaKnown RBP11.29□□□□□ -0.6
SNRPF-205ENST00000553192 SLC26A1Q9H2B4 701 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 DEF6Q9H4E7 631 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 WDR54Q9H977 334 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 TXLNGQ9NUQ3 528 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 COQ3Q9NZJ6 369 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 FAM90A27PA6NNH2 459 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 NPIPA5E9PKD4 350 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 USP1O94782 785 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 ALBP02768 609 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 CELA2AP08217 269 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 PIRTP0C851 137 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 DGKQP52824 942 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 HSF1Q00613 529 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 GTF3C1Q12789 2109 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 HIBCHQ6NVY1 386 aaPredicted RBP11.28□□□□□ -0.6
SNRPF-205ENST00000553192 DNAJC24Q6P3W2 148 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 MON1BQ7L1V2 547 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 TRIM73Q86UV7 250 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 PHC2Q8IXK0 858 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 KBTBD2Q8IY47 623 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 C19orf47Q8N9M1 422 aaKnown RBP11.28□□□□□ -0.6
SNRPF-205ENST00000553192 LILRB4Q8NHJ6 448 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 ZNF653Q96CK0 615 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 RNF32Q9H0A6 362 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 LRFN1Q9P244 771 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 NPIPA1Q9UND3 350 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 MRPS2Q9Y399 296 aaKnown RBP11.28□□□□□ -0.6
SNRPF-205ENST00000553192 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 TLN2Q9Y4G6 2542 aa11.28□□□□□ -0.6
SNRPF-205ENST00000553192 OR5H15A6NDH6 313 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 OR2AG2A6NM03 316 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 GPR39O43194 453 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 MAP3K7O43318 606 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 WIPF1O43516 503 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 GFPT2O94808 682 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 SLC4A1P02730 911 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 CALB1P05937 261 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 MMP2P08253 660 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 UCHL3P15374 230 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 ALAS2P22557 587 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 SPAM1P38567 509 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
SNRPF-205ENST00000553192 OLIG2Q13516 323 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 GTF2H3Q13889 308 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 SLC5A12Q1EHB4 618 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 SIAH3Q8IW03 269 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 BEND7Q8N7W2 519 aaPredicted RBP11.27□□□□□ -0.61
SNRPF-205ENST00000553192 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 LCN9Q8WX39 176 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 MAML1Q92585 1016 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 N4BP2L2Q92802 583 aaPredicted RBP11.27□□□□□ -0.61
SNRPF-205ENST00000553192 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 STK33Q9BYT3 514 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 SRMSQ9H3Y6 488 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 GDPD2Q9HCC8 539 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 RNF6Q9Y252 685 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 ZDHHC9Q9Y397 364 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 ASB1Q9Y576 335 aa11.27□□□□□ -0.61
SNRPF-205ENST00000553192 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 INAFM1C9JVW0 142 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 ASNA1O43681 348 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 SERPINA7P05543 415 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 ABOP16442 354 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 NDUFS1P28331 727 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 PBLDP30039 288 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 MIPP30301 263 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 CLEC16AQ2KHT3 1053 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 ATG9BQ674R7 924 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 TLDC1Q6P9B6 456 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 TMEM220Q6QAJ8 160 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 CAMKMTQ7Z624 323 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 ADGRF3Q8IZF5 1079 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 DNAJC22Q8N4W6 341 aa11.26□□□□□ -0.61
SNRPF-205ENST00000553192 TAB3Q8N5C8 712 aaPredicted RBP11.26□□□□□ -0.61
SNRPF-205ENST00000553192 LILRA3Q8N6C8 439 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms