RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 DIRAS1O95057 198 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ZFP36L2P47974 494 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 RPL38P63173 70 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 RAPSNQ13702 412 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 CYP20A1Q6UW02 462 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 TMEM179BQ7Z7N9 219 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 CCDC117Q8IWD4 279 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 EID3Q8N140 333 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 OR4K2Q8NGD2 314 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 KIAA1191Q96A73 305 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 PPP1R2P1Q96PQ5 205 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 PAK6Q9NQU5 681 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ZNF639Q9UID6 485 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 E5RI56 91 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 BCKDKO14874 412 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ADAM12O43184 909 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 UGT2B4P06133 528 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 MMP2P08253 660 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ITGB6P18564 788 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 SERPINB10P48595 397 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 NPTX1Q15818 432 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 GTDC1Q4AE62 458 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 RFTN2Q52LD8 501 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 COQ5Q5HYK3 327 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 RTP2Q5QGT7 225 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 PIK3R6Q5UE93 754 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 Q6ZSR9 355 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 GPSM1Q86YR5 675 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 MICU2Q8IYU8 434 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 EEF1AKMT1Q8WVE0 214 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 FUBP1Q96AE4 644 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 CNDP2Q96KP4 475 aaKnown RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ASPSCR1Q9BZE9 553 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 C6orf62Q9GZU0 229 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 ABCC13Q9NSE7 274 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 MARCH5Q9NX47 278 aa12.14□□□□□ -0.47
HDAC7-230ENST00000552960 TSC2P49815 1807 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 MROH6A6NGR9 719 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 AGRPO00253 132 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TBX1O43435 398 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 EOMESO95936 686 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PFKLP17858 780 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ITGB8P26012 769 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ACVRL1P37023 503 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 SLC26A3P40879 764 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 TLE2Q04725 743 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 SYT16Q17RD7 645 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 P2RY8Q86VZ1 359 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ZFAND4Q86XD8 727 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PGBD5Q8N414 524 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 MUL1Q969V5 352 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 VWCEQ96DN2 955 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 MTFMTQ96DP5 389 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ZNF583Q96ND8 569 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RPRD1AQ96P16 312 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 OSBPL10Q9BXB5 764 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 SMOC2Q9H3U7 446 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 IKZF5Q9H5V7 419 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ARNT2Q9HBZ2 717 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 DNAJB9Q9UBS3 223 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 GPR39O43194 453 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RPP40O75818 363 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PAPSS2O95340 614 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 ZNF682O95780 498 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 STC1P52823 247 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RPS3AP61247 264 aaKnown RBP12.13□□□□□ -0.47
HDAC7-230ENST00000552960 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 BRMS1LQ5PSV4 323 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 CATSPEREQ5SY80 951 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 LETMD1Q6P1Q0 360 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 POC5Q8NA72 575 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 BHMTQ93088 406 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 CDKN2AIPNLQ96HQ2 116 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 SPON2Q9BUD6 331 aa12.13□□□□□ -0.47
HDAC7-230ENST00000552960 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms