RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TEDDM1Q5T9Z0 273 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 ZNF549Q6P9A3 640 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 CNSTQ6PJW8 725 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 CEP128Q6ZU80 1094 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 RAB11FIP2Q7L804 512 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 PRSS42Q7Z5A4 293 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 SLC26A11Q86WA9 606 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 OOSP2Q86WS3 158 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 DCUN1D3Q8IWE4 304 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 LSMEM2Q8N112 164 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 ZBTB2Q8N680 514 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 OR5AR1Q8NGP9 310 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 ZCCHC14Q8WYQ9 949 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 FERD3LQ96RJ6 166 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 CMKLR1Q99788 373 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 AARSD1Q9BTE6 412 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 TFB2MQ9H5Q4 396 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 CCDC86Q9H6F5 360 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 L2HGDHQ9H9P8 463 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 NSMCE4AQ9NXX6 385 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 AKAP7Q9P0M2 348 aaPredicted RBP11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 SLC17A6Q9P2U8 582 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 POLG2Q9UHN1 485 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 MED16Q9Y2X0 877 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 LOXL2Q9Y4K0 774 aa11.4□□□□□ -0.58
TRAFD1-209ENST00000552896 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 EIF3FO00303 357 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 MATN2O00339 956 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 VPS26AO75436 327 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 SPAG6O75602 509 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 HAUS5O94927 633 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CAPNS1P04632 268 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ITGA2BP08514 1039 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CHRM3P20309 590 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 SHMT2P34897 504 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CARSP49589 748 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ILF2Q12905 390 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 C16orf72Q14CZ0 275 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 NEK10Q6ZWH5 1172 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ARHGAP22Q7Z5H3 698 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CCDC25Q86WR0 208 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CARFQ8N187 725 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 KDF1Q8NAX2 398 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 AGBL5Q8NDL9 886 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 RCBTB1Q8NDN9 531 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 OR52E1Q8NGJ3 308 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 GIMAP7Q8NHV1 300 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CD200R1Q8TD46 325 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 LCN9Q8WX39 176 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 JPH3Q8WXH2 748 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ZDHHC12Q96GR4 267 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 C9orf72Q96LT7 481 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 TGM7Q96PF1 710 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 CD180Q99467 661 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 TSPYL1Q9H0U9 437 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 SRMSQ9H3Y6 488 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ZNF768Q9H5H4 540 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 MTRF1LQ9UGC7 380 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 DMGDHQ9UI17 866 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-209ENST00000552896 TCRBV9S1A1TA0A576 114 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PMS2P1A4D2B8 440 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 OR6C74A6NCV1 312 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 TLCD2A6NGC4 264 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 AHSGP02765 367 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 JMJD7P0C870 316 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 ENO3P13929 434 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CD9P21926 228 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 GABRB3P28472 473 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PKLRP30613 574 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 SSTR1P30872 391 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 STX2P32856 288 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CSTF2P33240 577 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CCNFP41002 786 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 MAGEA4P43358 317 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 ERVPABLB-1P60509 514 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CUL1Q13616 776 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 TBC1D25Q3MII6 688 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 UGT3A1Q6NUS8 523 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 IRGCQ6NXR0 463 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CAPN12Q6ZSI9 719 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CYS1Q717R9 158 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 AMIGO1Q86WK6 493 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PALM2Q8IXS6 379 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 FBXO39Q8N4B4 442 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 SIDT2Q8NBJ9 832 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PHC3Q8NDX5 983 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 MDM1Q8TC05 714 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CDKL2Q92772 493 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 FAM136AQ96C01 138 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 PRR11Q96HE9 360 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 FOPNLQ96NB1 174 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 NDNQ99608 321 aa11.38□□□□□ -0.59
TRAFD1-209ENST00000552896 GPR21Q99679 349 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms