RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IFNB1P01574 187 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 MSH3P20585 1137 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 VARSP26640 1264 aaKnown RBP11.51□□□□□ -0.57
CKAP4-202ENST00000552828 NDUFS1P28331 727 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 GDF10P55107 478 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 ITGA1P56199 1179 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 DUS1LQ6P1R4 473 aaKnown RBP11.51□□□□□ -0.57
CKAP4-202ENST00000552828 MED25Q71SY5 747 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 ENDOVQ8N8Q3 282 aaKnown RBP11.51□□□□□ -0.57
CKAP4-202ENST00000552828 CCDC89Q8N998 374 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 TMEM102Q8N9M5 508 aaPredicted RBP11.51□□□□□ -0.57
CKAP4-202ENST00000552828 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 C12orf66Q96MD2 445 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 PPM1MQ96MI6 270 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 CCM2Q9BSQ5 444 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 POMT2Q9UKY4 750 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 SNX7Q9UNH6 387 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 LRBAP50851 2863 aa11.51□□□□□ -0.57
CKAP4-202ENST00000552828 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 SLC9B1P1A6NJY1 282 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 TCP11X1B4DZS4 312 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PGRMC1O00264 195 aaKnown RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 STX7O15400 261 aaKnown RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PSMD3O43242 534 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 TMEM63AO94886 807 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 DDAH2O95865 285 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 AGTP01019 485 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 RNF224P0DH78 156 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 TCP1P17987 556 aaKnown RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 AKT1P31749 480 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 ABRQ12979 859 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PTPRCAPQ14761 206 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PRAMEF17Q5VTA0 474 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 FBXO38Q6PIJ6 1188 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 FAM198BQ6UWH4 519 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 DET1Q7L5Y6 550 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 GSTA5Q7RTV2 222 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PRELID2Q8N945 189 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 ACVR1CQ8NER5 493 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 OR4E2Q8NGC2 313 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 OR1L3Q8NH93 324 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 ACTRT1Q8TDG2 376 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PNPLA2Q96AD5 504 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 RMDN2Q96LZ7 410 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 NAPGQ99747 312 aaPredicted RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 C19orf43Q9BQ61 176 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 DPH2Q9BQC3 489 aaPredicted RBP11.5□□□□□ -0.57
CKAP4-202ENST00000552828 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 NUDT9Q9BW91 350 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PITPNM3Q9BZ71 974 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 FANCEQ9HB96 536 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 HEBP2Q9Y5Z4 205 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 ARL5AQ9Y689 179 aa11.5□□□□□ -0.57
CKAP4-202ENST00000552828 C17orf113A0A1B0GUU1 675 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 CTAGE9A4FU28 777 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 C2orf81A6NN90 581 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 SRP72O76094 671 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 METTL18O95568 372 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 POLR2CP19387 275 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 PBLDP30039 288 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 PRDX3P30048 256 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 ADRA1AP35348 466 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 ARCN1P48444 511 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 XIAPP98170 497 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 PRKAA1Q13131 559 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 TAF1AQ15573 450 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF658BQ4V348 819 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 SLC6A19Q695T7 634 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 RANBP10Q6VN20 620 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 SYTL1Q8IYJ3 562 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 CFAP206Q8IYR0 622 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 LILRA3Q8N6C8 439 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 RBMXL3Q8N7X1 1067 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 CLIP3Q96DZ5 547 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 TFB2MQ9H5Q4 396 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 ASB8Q9H765 288 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 ACTR5Q9H9F9 607 aaPredicted RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 PAK5Q9P286 719 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 C5AR2Q9P296 337 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
CKAP4-202ENST00000552828 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
CKAP4-202ENST00000552828 GOLGA6L10A0A0M3HER8 536 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 ERI2A8K979 691 aaKnown RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 ZNF185O15231 689 aa11.48□□□□□ -0.57
CKAP4-202ENST00000552828 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
CKAP4-202ENST00000552828 POLBP06746 335 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms