RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 GPR135Q8IZ08 494 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
SNRPF-203ENST00000551316 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 C12orf66Q96MD2 445 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 SIGLEC12Q96PQ1 595 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 AP4E1Q9UPM8 1137 aa12.89□□□□□ -0.35
SNRPF-203ENST00000551316 SCN2AQ99250 2005 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 PMPCBO75439 489 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 LSM8O95777 96 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 PIRTP0C851 137 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 ITGAMP11215 1152 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 CHRNB4P30926 498 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 PTGER1P34995 402 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 MMP13P45452 471 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 NR0B1P51843 470 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KRT85P78386 507 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 ALDH6A1Q02252 535 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 QPCTQ16769 361 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 NEK10Q6ZWH5 1172 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 OVCH1Q7RTY7 1134 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 BEND7Q8N7W2 519 aaPredicted RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 ARMC2Q8NEN0 867 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 FKBP10Q96AY3 582 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 DHX35Q9H5Z1 703 aaKnown RBP12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KCNJ16Q9NPI9 418 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 KLHL1Q9NR64 748 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 TXLNGQ9NUQ3 528 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 FAM8A1Q9UBU6 413 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 ARID1AO14497 2285 aa12.88□□□□□ -0.35
SNRPF-203ENST00000551316 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 ASPDHA6ND91 283 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 ASNA1O43681 348 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 USP1O94782 785 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 TSPAN12O95859 305 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 F13A1P00488 732 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 RPL7AP62424 266 aaKnown RBP12.87□□□□□ -0.35
SNRPF-203ENST00000551316 EEF1A2Q05639 463 aaKnown RBP12.87□□□□□ -0.35
SNRPF-203ENST00000551316 DPYSQ14117 519 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 Q5PR19 223 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 HMBOX1Q6NT76 420 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 TRAM1L1Q8N609 369 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 RASGEF1AQ8N9B8 481 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 CCDC110Q8TBZ0 833 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 SNRNP25Q9BV90 132 aaKnown RBP12.87□□□□□ -0.35
SNRPF-203ENST00000551316 RNF32Q9H0A6 362 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 WDR54Q9H977 334 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
SNRPF-203ENST00000551316 CRIM1Q9NZV1 1036 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 AP1M2Q9Y6Q5 423 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 MPDZO75970 2070 aa12.87□□□□□ -0.35
SNRPF-203ENST00000551316 ZNF407Q9C0G0 2248 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 POP7O75817 140 aaKnown RBP12.86□□□□□ -0.35
SNRPF-203ENST00000551316 MED26O95402 600 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
SNRPF-203ENST00000551316 KRT3P12035 628 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 ACPPP15309 386 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 CHRNB2P17787 502 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 NIPAL4Q0D2K0 466 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 KEAP1Q14145 624 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 ARHGEF18Q6ZSZ5 1173 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 TTLL10Q6ZVT0 673 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 AMZ2Q86W34 360 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
SNRPF-203ENST00000551316 RAVER1Q8IY67 606 aaKnown RBP12.86□□□□□ -0.35
SNRPF-203ENST00000551316 MDS2Q8NDY4 140 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 SIMC1Q8NDZ2 872 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 SLC26A1Q9H2B4 701 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 XKR8Q9H6D3 395 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 CTNND2Q9UQB3 1225 aa12.86□□□□□ -0.35
SNRPF-203ENST00000551316 A0A1W2PPR1 153 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 OR2AG2A6NM03 316 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 A6NNC1 897 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 MAP2K7O14733 419 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-203ENST00000551316 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-203ENST00000551316 NEFLP07196 543 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 CD63P08962 238 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 CD53P19397 219 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 MCM3P25205 808 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 OR1D4P47884 311 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 EFNA3P52797 238 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 DCDC1P59894 354 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 DCAF7P61962 342 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms