RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 HIST1H2AHQ96KK5 128 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 HIST1H2AJQ99878 128 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 H2AFJQ9BTM1 129 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 NUSAP1Q9BXS6 441 aaKnown RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 TM7SF3Q9NS93 570 aa19.24■□□□□ 0.67
SSH1-209ENST00000551165 FARSBQ9NSD9 589 aaKnown RBP19.24■□□□□ 0.67
SSH1-209ENST00000551165 C9JVG2 144 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 ENTPD5O75356 428 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 POP7O75817 140 aaKnown RBP19.23■□□□□ 0.67
SSH1-209ENST00000551165 OTCP00480 354 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 ENO2P09104 434 aaPredicted RBP19.23■□□□□ 0.67
SSH1-209ENST00000551165 ITPKAP23677 461 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 DIO3P55073 304 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 PTK2BQ14289 1009 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 NFE2L1Q14494 772 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 ABRAXAS2Q15018 415 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 AGKQ53H12 422 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 SDE2Q6IQ49 451 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 FAM83HQ6ZRV2 1179 aaPredicted RBP19.23■□□□□ 0.67
SSH1-209ENST00000551165 C11orf96Q7Z7L8 435 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 SLC22A15Q8IZD6 547 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 LMNTD1Q8N9Z9 388 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 RP9Q8TA86 221 aaKnown RBP19.23■□□□□ 0.67
SSH1-209ENST00000551165 GLMNQ92990 594 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 NPAS2Q99743 824 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 EPHX3Q9H6B9 360 aa19.23■□□□□ 0.67
SSH1-209ENST00000551165 A0A088AWK7 358 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 PSMD12O00232 456 aaPredicted RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 PSIP1O75475 530 aaKnown RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 GSTM1P09488 218 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 GGT5P36269 586 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 CDK3Q00526 305 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 GSTM4Q03013 218 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 FASTKQ14296 549 aaKnown RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 SQLEQ14534 574 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 STARD3Q14849 445 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 TTC31Q49AM3 519 aaPredicted RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 IL27RAQ6UWB1 636 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 FAM124AQ86V42 546 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SPDYE1Q8NFV5 336 aaPredicted RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 MCOLN3Q8TDD5 553 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 RTKNQ9BST9 563 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 TRIM54Q9BYV2 358 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC23A2Q9UGH3 650 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 PACSIN3Q9UKS6 424 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC22A14Q9Y267 594 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC16A5O15375 505 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 PRAMEF4O60810 478 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 WDR47O94967 919 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 PRR35P0CG20 571 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 EPB42P16452 691 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 CYP2A7P20853 494 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 MAT2AP31153 395 aaKnown RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC6A12P48065 614 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 ERFP50548 548 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 NUDT2P50583 147 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 CDKL1Q00532 357 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 GRSF1Q12849 480 aaKnown RBP eCLIP19.22■□□□□ 0.67
SSH1-209ENST00000551165 IRF4Q15306 451 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 TMEM31Q5JXX7 168 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 PRAMEF9Q5VWM5 478 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 ADAMTSL4Q6UY14 1074 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 MYLK4Q86YV6 388 aaPredicted RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 FUNDC1Q8IVP5 155 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 ULK2Q8IYT8 1036 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 DEFB107AQ8IZN7 70 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC32A1Q9H598 525 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 UBE2ZQ9H832 354 aaPredicted RBP19.22■□□□□ 0.67
SSH1-209ENST00000551165 ZNHIT2Q9UHR6 403 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 DNAH14Q0VDD8 3507 aa19.22■□□□□ 0.67
SSH1-209ENST00000551165 SLC22A2O15244 555 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 DNTTP04053 509 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 LBPP18428 481 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 GPX3P22352 226 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 ADSLP30566 484 aaPredicted RBP19.21■□□□□ 0.67
SSH1-209ENST00000551165 MNAT1P51948 309 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 SP140Q13342 867 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 SKIV2LQ15477 1246 aaKnown RBP19.21■□□□□ 0.67
SSH1-209ENST00000551165 DNAL1Q4LDG9 190 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 TMEM92Q6UXU6 159 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 PPFIBP2Q8ND30 876 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 RPLP0P6Q8NHW5 317 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 C1orf50Q9BV19 199 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 ZCCHC2Q9C0B9 1178 aaKnown RBP19.21■□□□□ 0.67
SSH1-209ENST00000551165 FZD3Q9NPG1 666 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 TRPV5Q9NQA5 729 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 A0A1W2PQU0 124 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 H3BM21 787 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 CHEK2O96017 543 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 KPNB1Q14974 876 aaKnown RBP19.21■□□□□ 0.67
SSH1-209ENST00000551165 SCUBE1Q8IWY4 988 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 SFRP1Q8N474 314 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 MYOCQ99972 504 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 SLC7A8Q9UHI5 535 aa19.21■□□□□ 0.67
SSH1-209ENST00000551165 PDE5AO76074 875 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 FUCA1P04066 466 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 ADPRHP54922 357 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 PFN3P60673 137 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 RIPK1Q13546 671 aa19.2■□□□□ 0.66
SSH1-209ENST00000551165 GTF2H3Q13889 308 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms