RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ZBTB9Q96C00 473 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 BICD1Q96G01 975 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 PRMT6Q96LA8 375 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-205ENST00000550592 LINC00615Q96LM1 132 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-205ENST00000550592 MS4A10Q96PG2 267 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 SEMA6AQ9H2E6 1030 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 LRMDAQ9H2I8 198 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 EQTNQ9NQ60 294 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 VDAC3Q9Y277 283 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 OR2W1Q9Y3N9 320 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 EVPLQ92817 2033 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 TECPR2O15040 1411 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 EEA1Q15075 1411 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 CGNL1Q0VF96 1302 aa4.71□□□□□ -1.66
LIMA1-205ENST00000550592 A0A1W2PRQ8 180 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TSPY2A6NKD2 308 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 C4orf47A7E2U8 309 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ZNHIT1O43257 154 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 MED24O75448 989 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TADA2AO75478 443 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 CCDC175P0C221 793 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TSPY3P0CV98 308 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TSPY8P0CW00 308 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 HLA-DOBP13765 273 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ITGA2P17301 1181 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 GM2AP17900 193 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 POLR2CP19387 275 aaPredicted RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 DNASE1P24855 282 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 GABRA5P31644 462 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 CCKBRP32239 447 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 MC5RP33032 325 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ISL1P61371 349 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TSPY1Q01534 308 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 POU5F1Q01860 360 aaKnown RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ROR1Q01973 937 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ARMC4Q5T2S8 1044 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 C6orf163Q5TEZ5 329 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 PLEKHM3Q6ZWE6 761 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 CREB3L2Q70SY1 520 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 IQCHQ86VS3 1027 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TMEM173Q86WV6 379 aaPredicted RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 VSIG1Q86XK7 387 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ZNF595Q8IYB9 648 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 Q8NFD4 153 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TMEM255BQ8WV15 326 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 PHF21AQ96BD5 680 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 RTP4Q96DX8 246 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ADGRG7Q96K78 797 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 LYZL4Q96KX0 146 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 FAM81BQ96LP2 452 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 OLFM1Q99784 485 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 NEURL2Q9BR09 285 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 ZPBPQ9BS86 351 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 EDEM3Q9BZQ6 932 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TM6SF1Q9BZW5 370 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 SLA2Q9H6Q3 261 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 NOL11Q9H8H0 719 aaKnown RBP4.7□□□□□ -1.66
LIMA1-205ENST00000550592 HHATLQ9HCP6 504 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 SELENONQ9NZV5 590 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 TUBE1Q9UJT0 475 aa4.7□□□□□ -1.66
LIMA1-205ENST00000550592 C15orf62A8K5M9 175 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 HNRNPCL2B2RXH8 293 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 INSIG1O15503 277 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 TSPAN1O60635 241 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 WDR1O75083 606 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 C22orf31O95567 290 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 ZBTB11O95625 1053 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 HSPA4LO95757 839 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 LDLRP01130 860 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 DANCRP0C864 163 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 HSPA8P11142 646 aaKnown RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 ARCN1P48444 511 aaKnown RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 THBS3P49746 956 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 RAB28P51157 221 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 FOXG1P55316 489 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 NANOS2P60321 138 aaKnown RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 PLIN5Q00G26 463 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 TROAPQ12815 778 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 RALGDSQ12967 914 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 SNTA1Q13424 505 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 COG2Q14746 738 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 KIF19Q2TAC6 998 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 GCNT6Q5T4J0 391 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 RNASEH2BQ5TBB1 312 aaKnown RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 KMT5CQ86Y97 462 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 MAML2Q8IZL2 1156 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 MOSPD2Q8NHP6 518 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 LNX1Q8TBB1 728 aaPredicted RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 HDAC11Q96DB2 347 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 ABHD6Q9BV23 337 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 ST6GALNAC4Q9H4F1 302 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 EBF2Q9HAK2 575 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 SH3GLB2Q9NR46 395 aa4.69□□□□□ -1.66
LIMA1-205ENST00000550592 MBNL1Q9NR56 388 aaKnown RBP4.69□□□□□ -1.66
LIMA1-205ENST00000550592 KLHL1Q9NR64 748 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms