RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FRYLO94915 3013 aa12.3□□□□□ -0.44
CACNB3-217ENST00000550483 DMXL1Q9Y485 3027 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ZNF839A8K0R7 811 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 K7ESM1 405 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 NARSO43776 548 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 UGDHO60701 494 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ZNF217O75362 1048 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 POP7O75817 140 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 WDR47O94967 919 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 EBLN1P0CF75 366 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 EPB42P16452 691 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ZNF8P17098 575 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 NDUFV2P19404 249 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 HSD17B2P37059 387 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ATP4BP51164 291 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 SH3BP2P78314 561 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ZNF33BQ06732 778 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 IRF4Q15306 451 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 MAPRE2Q15555 327 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 PDCD2Q16342 344 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 PHKG1Q16816 387 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 KIAA1324Q6UXG2 1013 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 CPSF7Q8N684 471 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ATP6V1E2Q96A05 226 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 C19orf60Q96EN9 201 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 RAB3IPQ96QF0 476 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 IER2Q9BTL4 223 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 SLC29A3Q9BZD2 475 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 LRMDAQ9H2I8 198 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ITM2CQ9NQX7 267 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 TMEM45AQ9NWC5 275 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 USP36Q9P275 1121 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
CACNB3-217ENST00000550483 TAGLN3Q9UI15 199 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 ACSL5Q9ULC5 683 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 DMTF1Q9Y222 760 aa12.29□□□□□ -0.44
CACNB3-217ENST00000550483 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SDHDO14521 159 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 UBFD1O14562 309 aaKnown RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 FPGTO14772 594 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CCNT2O60583 730 aaKnown RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 GUCA1CO95843 209 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CHRNB1P11230 501 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 ESRRAP11474 423 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 HNRNPA2B1P22626 353 aaKnown RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 PTPN4P29074 926 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 AKT2P31751 481 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CCR10P46092 362 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SLC6A12P48065 614 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CCR5P51681 352 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CCNG1P51959 295 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CDH13P55290 713 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 STARD6P59095 220 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 NCALDP61601 193 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 ZXDAP98168 799 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 BTKQ06187 659 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 INPP5AQ14642 412 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 HERC3Q15034 1050 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SMU1Q2TAY7 513 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 GGTA1PQ4G0N0 100 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SLC9B1Q4ZJI4 515 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 C10orf62Q5T681 223 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 LPCAT2Q7L5N7 544 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 GOLGA7Q7Z5G4 137 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 CACUL1Q86Y37 369 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 UBALD2Q8IYN6 164 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 ARHGAP24Q8N264 748 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 TWIST2Q8WVJ9 160 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 TMEM79Q9BSE2 394 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 OSBPL6Q9BZF3 934 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 IPPKQ9H8X2 491 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SEMA4BQ9NPR2 832 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
CACNB3-217ENST00000550483 GPRC5BQ9NZH0 403 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 SLC17A4Q9Y2C5 497 aa12.28□□□□□ -0.44
CACNB3-217ENST00000550483 ANTXRLA6NF34 631 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 IFRD1O00458 451 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-217ENST00000550483 TNFRSF10CO14798 259 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 TAPBPO15533 448 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 KDM1AO60341 852 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 PAK4O96013 591 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-217ENST00000550483 GABRG2P18507 467 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 NCF2P19878 526 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-217ENST00000550483 CCND1P24385 295 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 HTR1BP28222 390 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 HSPA7P48741 367 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 MRPL19P49406 292 aaKnown RBP12.27□□□□□ -0.45
CACNB3-217ENST00000550483 AGTR2P50052 363 aa12.27□□□□□ -0.45
CACNB3-217ENST00000550483 TPMTP51580 245 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms