RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FMO2Q99518 471 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 WDR83Q9BRX9 315 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 KIFC1Q9BW19 673 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 TSPYL1Q9H0U9 437 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 EPN3Q9H201 632 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MRM3Q9HC36 420 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 WASH6PQ9NQA3 447 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 SYBUQ9NX95 663 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 IL17CQ9P0M4 197 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
NUP188-211ENST00000550219 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 ARL5AQ9Y689 179 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 TEX264Q9Y6I9 313 aa13.1□□□□□ -0.31
NUP188-211ENST00000550219 HEATR9A2RTY3 570 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 STX7O15400 261 aaKnown RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 TIAF1O95411 115 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 PRAMEF1O95521 474 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 MYBL2P10244 700 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 MSH3P20585 1137 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 TUBB3Q13509 450 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 SEPT6Q14141 434 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 ERV3-1Q14264 604 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 POU6F1Q14863 301 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 RPE65Q16518 533 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 CEP128Q6ZU80 1094 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 CENPUQ71F23 418 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 PPP1R3BQ86XI6 285 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 IGDCC3Q8IVU1 814 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 SIDT2Q8NBJ9 832 aaKnown RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 APOBEC4Q8WW27 367 aaKnown RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 PEX13Q92968 403 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 EBNA1BP2Q99848 306 aaKnown RBP13.09□□□□□ -0.31
NUP188-211ENST00000550219 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
NUP188-211ENST00000550219 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 TCAF1Q9Y4C2 921 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 PCDHB3Q9Y5E6 796 aa13.09□□□□□ -0.31
NUP188-211ENST00000550219 IGHV5-51A0A0C4DH38 117 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 FAM237BA0A1B0GVD1 139 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 CDC14CA4D256 554 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 C2orf81A6NN90 581 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 BANF1O75531 89 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 SPAG6O75602 509 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 CRTAMO95727 393 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 EBLN1P0CF75 366 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 MTHFD1P11586 935 aaKnown RBP13.08□□□□□ -0.32
NUP188-211ENST00000550219 NR1D1P20393 614 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 ARCN1P48444 511 aaKnown RBP13.08□□□□□ -0.32
NUP188-211ENST00000550219 ARL4DP49703 201 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 ZNF140P52738 457 aaPredicted RBP13.08□□□□□ -0.32
NUP188-211ENST00000550219 CRADDP78560 199 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 PDE1BQ01064 536 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 ACVR1Q04771 509 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 DMPKQ09013 629 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 PDIA2Q13087 525 aaKnown RBP13.08□□□□□ -0.32
NUP188-211ENST00000550219 IL11RAQ14626 422 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 BBS9Q3SYG4 887 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
NUP188-211ENST00000550219 TMEM135Q86UB9 458 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 KLHL6Q8WZ60 621 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 C12orf66Q96MD2 445 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 NAT9Q9BTE0 207 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 TXLNGYQ9BZA5 131 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 WWP1Q9H0M0 922 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 PLAC1Q9HBJ0 212 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 FKBPLQ9UIM3 349 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 RARRES3Q9UL19 164 aa13.08□□□□□ -0.32
NUP188-211ENST00000550219 ASH1LQ9NR48 2969 aaKnown RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 UBA6A0AVT1 1052 aaPredicted RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 KCNJ13O60928 360 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 FURINP09958 794 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 FAM153BP0C7A2 387 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CCNYL3P0C7X3 344 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 FGF5P12034 268 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 NELFEP18615 380 aaKnown RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 ELK3P41970 407 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 MAGEA4P43358 317 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 TMPRSS15P98073 1019 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 DNASE1L3Q13609 305 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 FASTKD3Q14CZ7 662 aaKnown RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 FAM153CQ494X1 144 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CCDC38Q502W7 563 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 TSTD2Q5T7W7 516 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 STEAP4Q687X5 459 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CYB5D1Q6P9G0 228 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 KLHL35Q6PF15 583 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CERS6Q6ZMG9 384 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
NUP188-211ENST00000550219 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 ZNF398Q8TD17 642 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 CT55Q8WUE5 264 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
NUP188-211ENST00000550219 ZNF778Q96MU6 729 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms