RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 DYNLT1P63172 113 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 DCDP81605 110 aaKnown RBP9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 RPA4Q13156 261 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 MSLNQ13421 630 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 RAPSNQ13702 412 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 TCEAL1Q15170 157 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 KYNUQ16719 465 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ODF2Q5BJF6 829 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 MLIPQ5VWP3 458 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 RHBDD2Q6NTF9 364 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 SARM1Q6SZW1 724 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 CDHR3Q6ZTQ4 885 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 DAAM2Q86T65 1068 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 KCNMB4Q86W47 210 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 AMIGO1Q86WK6 493 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 RHOT2Q8IXI1 618 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 GPR135Q8IZ08 494 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ADGRF3Q8IZF5 1079 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 LILRA3Q8N6C8 439 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ST6GALNAC3Q8NDV1 305 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 OR4K2Q8NGD2 314 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 OR2Y1Q8NGV0 311 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 P3H4Q92791 437 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 INPP5DQ92835 1189 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 DCUN1D1Q96GG9 259 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ILKAPQ9H0C8 392 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 OR52A5Q9H2C5 316 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 FAM60AQ9NP50 221 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ATP13A2Q9NQ11 1180 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 AGPAT4Q9NRZ5 378 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 P4HTMQ9NXG6 502 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 NTNG1Q9Y2I2 539 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 ARL5AQ9Y689 179 aa9.53□□□□□ -0.88
TRAFD1-207ENST00000550051 IGLV3-16A0A075B6K0 115 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 HACD1B0YJ81 288 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 IFRD1O00458 451 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 LDB2O43679 373 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 OR2B3O76000 313 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ANXA9O76027 345 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 KRT1P04264 644 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GSTM1P09488 218 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 CBSLP0DN79 551 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PVRP15151 417 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 CD46P15529 392 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PECAM1P16284 738 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ELAVL4P26378 380 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ADRA1AP35348 466 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 CBSP35520 551 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 FOLR3P41439 243 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GLRBP48167 497 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GABRA4P48169 554 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 LMAN1P49257 510 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 TPM4P67936 248 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GSTM4Q03013 218 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 BOP1Q14137 746 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PCM1Q15154 2024 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 NUP210LQ5VU65 1888 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 MRPL14Q6P1L8 145 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ADGRD1Q6QNK2 874 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 IGFL2Q6UWQ7 119 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PPP1R32Q7Z5V6 425 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 CUZD1Q86UP6 607 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 NXPE1Q8N323 547 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 OR52E1Q8NGJ3 308 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PROKR1Q8TCW9 393 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 COG1Q8WTW3 980 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 NAT14Q8WUY8 206 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ULK4Q96C45 1275 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GBP5Q96PP8 586 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 COPS8Q99627 209 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 FSD1LQ9BXM9 530 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 AP1M1Q9BXS5 423 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ZBTB20Q9HC78 741 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 ACTR10Q9NZ32 417 aa9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 IFT80Q9P2H3 777 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 GPN3Q9UHW5 284 aaPredicted RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 PTRH2Q9Y3E5 179 aaKnown RBP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAFD1-207ENST00000550051 DIDO1Q9BTC0 2240 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 F5H423 210 aaPredicted RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 AGPSO00116 658 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 HNRNPRO43390 633 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 HCRTR1O43613 425 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 CRTAMO95727 393 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 ONECUT2O95948 504 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 UMODP07911 640 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 PDHA2P29803 388 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 GEMP55040 296 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 PER3P56645 1201 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 AIMP2Q13155 320 aaKnown RBP9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 LLGL1Q15334 1064 aa9.51□□□□□ -0.89
TRAFD1-207ENST00000550051 GPR33Q49SQ1 333 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms