RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ABRQ12979 859 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 BOP1Q14137 746 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 GBX1Q14549 363 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ABRAXAS2Q15018 415 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ATP6AP1Q15904 470 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 PHKG1Q16816 387 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 C6orf52Q5T4I8 152 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 C10orf62Q5T681 223 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 PDE12Q6L8Q7 609 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 FBXL19Q6PCT2 694 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 BORAQ6PGQ7 559 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 SCIMPQ6UWF3 145 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 DPY19L3Q6ZPD9 716 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 NECAB2Q7Z6G3 386 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 IFNEQ86WN2 208 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CHERPQ8IWX8 916 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 NRSN1Q8IZ57 195 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ADGRG5Q8IZF4 528 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 GALNT15Q8N3T1 639 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 TRAM1L1Q8N609 369 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 MRPL43Q8N983 215 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 KLHL23Q8NBE8 558 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 OR52E4Q8NGH9 312 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CSGALNACT1Q8TDX6 532 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 SKA2Q8WVK7 121 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ASB11Q8WXH4 323 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 USP7Q93009 1102 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ESAMQ96AP7 390 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CMTM7Q96FZ5 175 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 RMND5BQ96G75 393 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ITCHQ96J02 903 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 RPL10LQ96L21 214 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 FOPNLQ96NB1 174 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CDK15Q96Q40 435 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CGREF1Q99674 301 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 CIB1Q99828 191 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 TMEM79Q9BSE2 394 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 YTHDF1Q9BYJ9 559 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ZCCHC2Q9C0B9 1178 aaKnown RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 SEMA6AQ9H2E6 1030 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 DNAJC11Q9NVH1 559 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 TUBA8Q9NY65 449 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-209ENST00000550020 B4GALT6Q9UBX8 382 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 PRKAG2Q9UGJ0 569 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 ERVW-1Q9UQF0 538 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 DMTF1Q9Y222 760 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 PRSS21Q9Y6M0 314 aa8.76□□□□□ -1.01
TMEM116-209ENST00000550020 LTBP2Q14767 1821 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 KIAA1671Q9BY89 1806 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PLXNA4Q9HCM2 1894 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 A0A1B0GTL3 188 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 C16orf96A6NNT2 1141 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 UPK3BL1B0FP48 263 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 LOC730098B7Z3J9 87 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 UPK3BL2E5RIL1 263 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PSMD11O00231 422 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PER2O15055 1255 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ANKRD28O15084 1053 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 MAP3K13O43283 966 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 MYO1DO94832 1006 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 RASAL1O95294 804 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CATP04040 527 aaKnown RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 C1SP09871 688 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 RAP2AP10114 183 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 HSD3B1P14060 373 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 TYRP14679 529 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 HSD3B2P26439 372 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 GKP32189 559 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CCR7P32248 378 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 S100A3P33764 101 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PEX19P40855 299 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ZFP36L2P47974 494 aaKnown RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CCT8P50990 548 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CLDN8P56748 225 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ROR2Q01974 943 aaKnown RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PLOD1Q02809 727 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 LRRC74AQ0VAA2 488 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CSTF3Q12996 717 aaKnown RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PTPRRQ15256 657 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 NRF1Q16656 503 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 KCTD21Q4G0X4 260 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ATP13A5Q4VNC0 1218 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 SYTL3Q4VX76 610 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 RFTN2Q52LD8 501 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ZNF805Q5CZA5 627 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 FBXO48Q5FWF7 155 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 RABL3Q5HYI8 236 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 PAGE3Q5JUK9 113 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 HABP4Q5JVS0 413 aaKnown RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 LIPJQ5W064 366 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 ATG9BQ674R7 924 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 GLYATQ6IB77 296 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 SLC2A7Q6PXP3 512 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 SPRED1Q7Z699 444 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 KIAA0907Q7Z7F0 614 aaPredicted RBP8.75□□□□□ -1.01
TMEM116-209ENST00000550020 AMIGO2Q86SJ2 522 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 TSPAN33Q86UF1 283 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 CARM1Q86X55 608 aa8.75□□□□□ -1.01
TMEM116-209ENST00000550020 TMEM25Q86YD3 366 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms