RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 SMIM31A0A1B0GVY4 71 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 BDKRB1P46663 353 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 PRMT2P55345 433 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 XIAPP98170 497 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 NFATC2Q13469 925 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 LAPTM4AQ15012 233 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 INO80DQ53TQ3 878 aaPredicted RBP14.71□□□□□ -0.05
CUX1-214ENST00000550008 ATAD3BQ5T9A4 648 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 ZNF605Q86T29 641 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 KCNJ9Q92806 393 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 UBE2E3Q969T4 207 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 MRPS26Q9BYN8 205 aaKnown RBP14.71□□□□□ -0.05
CUX1-214ENST00000550008 C11orf49Q9H6J7 331 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 AMBNQ9NP70 447 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 PDP1Q9P0J1 537 aaPredicted RBP14.71□□□□□ -0.05
CUX1-214ENST00000550008 MTRRQ9UBK8 725 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 OGDHLQ9ULD0 1010 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 DNAJC15Q9Y5T4 150 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 FAM234BA2RU67 622 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 CARNS1A5YM72 827 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 MMP20O60882 483 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 PGLSO95336 258 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 GM2AP17900 193 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 PPIGQ13427 754 aaKnown RBP eCLIP14.71□□□□□ -0.059e-7■■■□□ 18.1
CUX1-214ENST00000550008 HKDC1Q2TB90 917 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 GPAT3Q53EU6 434 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 KDELC1Q6UW63 502 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 CASP12Q6UXS9 341 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 SYVN1Q86TM6 617 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 NSMCE3Q96MG7 304 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 CGREF1Q99674 301 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 OSBPL6Q9BZF3 934 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 RNF38Q9H0F5 515 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 CTPS2Q9NRF8 586 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 NDOR1Q9UHB4 597 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 IKZF3Q9UKT9 509 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 SQORQ9Y6N5 450 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 DGKBQ9Y6T7 804 aa14.71□□□□□ -0.05
CUX1-214ENST00000550008 SERPINA1P01009 418 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 CTSEP14091 401 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 GNAZP19086 355 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 CD70P32970 193 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 PHKG1Q16816 387 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 TNFAIP8L3Q5GJ75 292 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 BROXQ5VW32 411 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 ANKRD26P1Q6NSI1 321 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 MRM3Q9HC36 420 aaKnown RBP14.71□□□□□ -0.06
CUX1-214ENST00000550008 KLHL28Q9NXS3 571 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 ADAMTS6Q9UKP5 1117 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 RREB1Q92766 1687 aa14.71□□□□□ -0.06
CUX1-214ENST00000550008 CXCR6O00574 342 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 WNT9AO14904 365 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 GABRB3P28472 473 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 CENPAP49450 140 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 VEGFBP49765 207 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 DEFB103AP81534 67 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 TGM3Q08188 693 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 C6orf136Q5SQH8 315 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 SUSD1Q6UWL2 747 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 NXPE1Q8N323 547 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 ZCCHC7Q8N3Z6 543 aaKnown RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 SOX17Q9H6I2 414 aaPredicted RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 GRID2O43424 1007 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 OR10H3O60404 316 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 SEC24AO95486 1093 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 DLGAP3O95886 979 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 OPN1SWP03999 348 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 DNTTP04053 509 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 SLC7A1P30825 629 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 NTSP30990 170 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 ETV3P41162 512 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 BUD31P41223 144 aaPredicted RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 TMEM25Q86YD3 366 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 DGCR14Q96DF8 476 aaKnown RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 ABHD8Q96I13 439 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 LRRC3Q9BY71 257 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 TESMINQ9Y4I5 508 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 THRBP10828 461 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 TNNI3P19429 210 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 TPP2P29144 1249 aaPredicted RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 DGKEP52429 567 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 FOXA1P55317 472 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 HSPB3Q12988 150 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 LDLRAP1Q5SW96 308 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 MED27Q6P2C8 311 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 HOMEZQ8IX15 550 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 AADATQ8N5Z0 425 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 CCDC177Q9NQR7 707 aaPredicted RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 EXD2Q9NVH0 621 aa14.7□□□□□ -0.06
CUX1-214ENST00000550008 RSL24D1Q9UHA3 163 aaKnown RBP14.7□□□□□ -0.06
CUX1-214ENST00000550008 LEFTY1O75610 366 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 PRKD3O94806 890 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 IL6P05231 212 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 GPIP06744 558 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 CXCR2P25025 360 aa14.69□□□□□ -0.06
CUX1-214ENST00000550008 ST13P50502 369 aaKnown RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 MEF2AQ02078 507 aaPredicted RBP14.69□□□□□ -0.06
CUX1-214ENST00000550008 ELP6Q0PNE2 266 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms