RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RBL1P28749 1068 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 OTX2P32243 289 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 ADRA1AP35348 466 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 KYNUQ16719 465 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 FAM69BQ5VUD6 431 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 BBS12Q6ZW61 710 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
TROAP-211ENST00000549891 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.3
TROAP-211ENST00000549891 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 OR13C4Q8NGS5 318 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 OR52A5Q9H2C5 316 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 ZDHHC3Q9NYG2 299 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 ACTR10Q9NZ32 417 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 FEZ2Q9UHY8 353 aaPredicted RBP13.15□□□□□ -0.3
TROAP-211ENST00000549891 B3GNT3Q9Y2A9 372 aa13.15□□□□□ -0.3
TROAP-211ENST00000549891 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 PCM1Q15154 2024 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 ZNF189O75820 626 aaPredicted RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 OR2B3O76000 313 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 CTNNA2P26232 953 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 FOLR3P41439 243 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 COPS2P61201 443 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 TMPRSS15P98073 1019 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 RAPSNQ13702 412 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 ELOAQ14241 798 aaKnown RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 ANKRD20A3Q5VUR7 823 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 SPESP1Q6UW49 350 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 CDHR3Q6ZTQ4 885 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 MRGPREQ86SM8 312 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 CDKL3Q8IVW4 592 aaPredicted RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 PROKR1Q8TCW9 393 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 TFGQ92734 400 aaPredicted RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
TROAP-211ENST00000549891 TCTN2Q96GX1 697 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 APOL2Q9BQE5 337 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 NDOR1Q9UHB4 597 aa13.14□□□□□ -0.31
TROAP-211ENST00000549891 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ENO4A6NNW6 628 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 QSOX1O00391 747 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 LDB2O43679 373 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 PVRP15151 417 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ACRV1P26436 265 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 PSMB4P28070 264 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 MC4RP32245 332 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 SHMT2P34897 504 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 DCDP81605 110 aaKnown RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 PRKG2Q13237 762 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 BOP1Q14137 746 aaKnown RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 MYBPC3Q14896 1274 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 NR6A1Q15406 480 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 DCAF10Q5QP82 559 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 MLIPQ5VWP3 458 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 RHBDD2Q6NTF9 364 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 C11orf63Q6NUN7 778 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 IGFL3Q6UXB1 125 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ADGRF3Q8IZF5 1079 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 GALNT16Q8N428 558 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 C19orf47Q8N9M1 422 aaKnown RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 PHC3Q8NDX5 983 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 HGH1Q9BTY7 390 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 HEMGNQ9BXL5 484 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 AP1M1Q9BXS5 423 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 CHRNA10Q9GZZ6 450 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 ILKAPQ9H0C8 392 aaPredicted RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 FAM96AQ9H5X1 160 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 TXLNGQ9NUQ3 528 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 SRPK3Q9UPE1 567 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 EFR3BQ9Y2G0 817 aa13.13□□□□□ -0.31
TROAP-211ENST00000549891 SNRNP200O75643 2136 aaKnown RBP13.13□□□□□ -0.31
TROAP-211ENST00000549891 ITPR2Q14571 2701 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 CREBBPQ92793 2442 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 DOPEY1Q5JWR5 2465 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 TRBV5-4A0A0C4DH59 114 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 WIPF3A6NGB9 483 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 H7C0S8 307 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 LIN7AO14910 233 aaPredicted RBP13.12□□□□□ -0.31
TROAP-211ENST00000549891 KDM1AO60341 852 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 AP2A2O94973 939 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 CBX6O95503 412 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 RNF224P0DH78 156 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 PDHA2P29803 388 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 MAGEA1P43355 309 aa13.12□□□□□ -0.31
TROAP-211ENST00000549891 OTUD4Q01804 1114 aaKnown RBP13.12□□□□□ -0.31
TROAP-211ENST00000549891 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
TROAP-211ENST00000549891 PLEKHN1Q494U1 663 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms