RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 BDKRB1P46663 353 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 IRF9Q00978 393 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 PRKG2Q13237 762 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 LRRC8EQ6NSJ5 796 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 UNC5DQ6UXZ4 953 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 DEFB124Q8NES8 71 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 FOPNLQ96NB1 174 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 TMEM109Q9BVC6 243 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 VPS11Q9H270 941 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 STN1Q9H668 368 aaKnown RBP20.65■□□□□ 0.9
VPS29-206ENST00000549578 TLK1Q9UKI8 766 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 IKZF3Q9UKT9 509 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 EME2A4GXA9 379 aaPredicted RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 RHPN2P1A8MT19 583 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 NUDT21O43809 227 aaKnown RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 RFPL1O75677 317 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 CKMT2P17540 419 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 GPR18Q14330 331 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 CSHL1Q14406 222 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 KRT71Q3SY84 523 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 TAF1BQ53T94 588 aaPredicted RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 TIFABQ6ZNK6 161 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 AVL9Q8NBF6 648 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 OR5K2Q8NHB8 316 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 JPH3Q8WXH2 748 aaPredicted RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 CCDC74AQ96AQ1 378 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 UBXN10Q96LJ8 280 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 CDC6Q99741 560 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 TRIT1Q9H3H1 467 aaKnown RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 MVB12BQ9H7P6 319 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 CIDEBQ9UHD4 219 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 ADAMTS6Q9UKP5 1117 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 CDV3Q9UKY7 258 aaKnown RBP20.64■□□□□ 0.9
VPS29-206ENST00000549578 ACOT9Q9Y305 439 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 COLEC10Q9Y6Z7 277 aa20.64■□□□□ 0.9
VPS29-206ENST00000549578 A0A1W2PPM1 405 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 KRT87PA6NCN2 255 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 SLC30A4O14863 429 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 PSIP1O75475 530 aaKnown RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 C1orf105O95561 183 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 KRT15P19012 456 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 DLG1Q12959 904 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 CCSMST1Q4G0I0 132 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 PERM1Q5SV97 790 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 CEP85LQ5SZL2 805 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 EFL1Q7Z2Z2 1120 aaKnown RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 TBC1D1Q86TI0 1168 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 TBC1D21Q8IYX1 336 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 RIBC1Q8N443 379 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 KCTD4Q8WVF5 259 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 ASB11Q8WXH4 323 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 PDLIM5Q96HC4 596 aaKnown RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 LGALS13Q9UHV8 139 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 TDRKHQ9Y2W6 561 aaKnown RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 A0A087X1B8 175 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 NPEPPSL1A6NEC2 478 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 ARHGEF33A8MVX0 844 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 GOLGA8RI6L899 631 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 CDC7O00311 574 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 TM4SF5O14894 197 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 NDUFS1P28331 727 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 DUSP3P51452 185 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 LRIG3Q6UXM1 1119 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 TMEM26Q6ZUK4 368 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 UBE2R2Q712K3 238 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 ZNF438Q7Z4V0 828 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 DCUN1D3Q8IWE4 304 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 CENPLQ8N0S6 344 aaPredicted RBP20.63■□□□□ 0.89
VPS29-206ENST00000549578 IFI44Q8TCB0 444 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 DLG3Q92796 817 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 NAT6Q93015 286 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 SLC38A3Q99624 504 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 NRTNQ99748 197 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 TBC1D10AQ9BXI6 508 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 DERL2Q9GZP9 239 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 KIR3DX1Q9H7L2 352 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 PCMTD2Q9NV79 361 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 EVA1BQ9NVM1 165 aa20.63■□□□□ 0.89
VPS29-206ENST00000549578 ASXL3Q9C0F0 2248 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 GFYI3L273 518 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 BTN3A1O00481 513 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 TNFSF14O43557 240 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 TOP3BO95985 862 aaKnown RBP20.62■□□□□ 0.89
VPS29-206ENST00000549578 MT-ND3P03897 115 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 CATP04040 527 aaKnown RBP20.62■□□□□ 0.89
VPS29-206ENST00000549578 RPN2P04844 631 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 MPOP05164 745 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 CD1DP15813 335 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 RSPO4Q2I0M5 234 aaPredicted RBP20.62■□□□□ 0.89
VPS29-206ENST00000549578 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.62■□□□□ 0.89
VPS29-206ENST00000549578 RASGRP3Q8IV61 690 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 Q8N9G6 341 aaPredicted RBP20.62■□□□□ 0.89
VPS29-206ENST00000549578 OR6C4Q8NGE1 309 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 OR52E1Q8NGJ3 308 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 SH3KBP1Q96B97 665 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 NXNL1Q96CM4 212 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 SLC32A1Q9H598 525 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 IGSF5Q9NSI5 407 aa20.62■□□□□ 0.89
VPS29-206ENST00000549578 PLAGL1Q9UM63 463 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms