RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CXorf51AA0A1B0GTR3 108 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CAPN1P07384 714 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CCNA2P20248 432 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 AGXTP21549 392 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 LEPRP48357 1165 aaKnown RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CLCN5P51795 746 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TUBA4AP68366 448 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 SPIDRQ14159 915 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 GLYATQ6IB77 296 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ANKRD26P1Q6NSI1 321 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 Q6ZNX1 250 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TPGS1Q6ZTW0 290 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 HJURPQ8NCD3 748 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TNIP2Q8NFZ5 429 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 GPATCH1Q9BRR8 931 aaKnown RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TRIM15Q9C019 465 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 LHPPQ9H008 270 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 MFSD1Q9H3U5 465 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 NANOGQ9H9S0 305 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 RASSF1Q9NS23 344 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 POLR3BQ9NW08 1133 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 KLQ9UEF7 1012 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ALPK3Q96L96 1907 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 XPNPEP2O43895 674 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CXCL14O95715 111 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ZNF682O95780 498 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CAPNS1P04632 268 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 G6PDP11413 515 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CD1DP15813 335 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 EPHA5P54756 1037 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ARHGEF7Q14155 803 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 INO80DQ53TQ3 878 aaPredicted RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 MPP7Q5T2T1 576 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CARNMT1Q8N4J0 409 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 GPR150Q8NGU9 434 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 HERVK_113Q902F9 699 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 TSSK3Q96PN8 268 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 RAD9AQ99638 391 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 BOCQ9BWV1 1114 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ITM2CQ9NQX7 267 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 INIPQ9NRY2 104 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 SACM1LQ9NTJ5 587 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ARMC1Q9NVT9 282 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ACTR3BQ9P1U1 418 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 FUOMA2VDF0 154 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 A8MU76 341 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 STX7O15400 261 aaKnown RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 HS6ST1O60243 411 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 NDST3O95803 873 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 NTRK1P04629 796 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 CYBBP04839 570 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ADH1AP07327 375 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 SERPINF2P08697 491 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 MTHFD2P13995 350 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 MC4RP32245 332 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 RAD23AP54725 363 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 NFATC3Q12968 1075 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ANKS6Q68DC2 871 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 TXNDC8Q6A555 127 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 MRNIPQ6NTE8 343 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 DCDC5Q6ZRR9 648 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 R3HCC1LQ7Z5L2 792 aaKnown RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 C11orf74Q86VG3 221 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 SNX19Q92543 992 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ACDQ96AP0 544 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 TMEM125Q96AQ2 219 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
LINC00661-204ENST00000549354 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 OAS3Q9Y6K5 1087 aaKnown RBP10.88□□□□□ -0.67
LINC00661-204ENST00000549354 ASPDHA6ND91 283 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TMEM247A6NEH6 219 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 SOBPA7XYQ1 873 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 MYCLP1P12525 358 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 GJA1P17302 382 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BMPR1AP36894 532 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 EIF2B2P49770 351 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ATP6V0D1P61421 351 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ARF5P84085 180 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TCEA2Q15560 299 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 ATP6AP1Q15904 470 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 PGS1Q32NB8 556 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TMTC4Q5T4D3 741 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 RNF219Q5W0B1 726 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 SYVN1Q86TM6 617 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 RBM12BQ8IXT5 1001 aaKnown RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BRSK1Q8TDC3 778 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 TMBIM1Q969X1 311 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CDKN2AIPNLQ96HQ2 116 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 BIRC8Q96P09 236 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 HOPXQ9BPY8 73 aaPredicted RBP10.87□□□□□ -0.67
LINC00661-204ENST00000549354 GPR63Q9BZJ6 419 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 CD84Q9UIB8 345 aa10.87□□□□□ -0.67
LINC00661-204ENST00000549354 SARDHQ9UL12 918 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms