RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ZNF639Q9UID6 485 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 PRSS21Q9Y6M0 314 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ANKRD36A6QL64 1941 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 KRT87PA6NCN2 255 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 SLC38A8A6NNN8 435 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 C16orf96A6NNT2 1141 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ADAM12O43184 909 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CYBAP13498 195 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 PFKLP17858 780 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ATF6P18850 670 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 FMO3P31513 532 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 GSSP48637 474 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 NEK2P51955 445 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CBX3Q13185 183 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 TAF12Q16514 161 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CYP2A13Q16696 494 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 TMEM173Q86WV6 379 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 EID2BQ96D98 161 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 MBOAT4Q96T53 435 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 C1QTNF3Q9BXJ4 246 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RIBC2Q9H4K1 309 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ST14Q9Y5Y6 855 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ANKRD28O15084 1053 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 AXIN1O15169 862 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RGS14O43566 566 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 NBNO60934 754 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CPNE6O95741 557 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CR2P20023 1033 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ARF5P84085 180 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RING1Q06587 406 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CRHR2Q13324 411 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 AQP6Q13520 282 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 SPATS1Q496A3 300 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 CACHD1Q5VU97 1274 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RGL4Q8IZJ4 473 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 EID3Q8N140 333 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ZNF548Q8NEK5 533 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 NETO1Q8TDF5 533 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 RAB2BQ8WUD1 216 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 PPP3R2Q96LZ3 170 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 VPS4AQ9UN37 437 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 DHRS7Q9Y394 339 aa11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 ARIH1Q9Y4X5 557 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 TNPO3Q9Y5L0 923 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-219ENST00000549151 LOC100130705A0A1B0GUX0 176 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 TAPBPO15533 448 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 CBFA2T3O75081 653 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 CLPXO76031 633 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 SEC14L2O76054 403 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 HTR1AP08908 422 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 HTR1BP28222 390 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 OPRL1P41146 370 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 MAGEA11P43364 429 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 MBTPS1Q14703 1052 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 PON2Q15165 354 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 TTC30BQ8N4P2 665 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 PNPT1Q8TCS8 783 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 FAM126AQ9BYI3 521 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 RIMKLBQ9ULI2 386 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 FUOMA2VDF0 154 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 BCAS1O75363 584 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 SH3BGRLO75368 114 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 CLDN11O75508 207 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 VNN2O95498 520 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 C1QCP02747 245 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 CKBP12277 381 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 MAP2K4P45985 399 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 GNPDA1P46926 289 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 TMBIM6P55061 237 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 BTG3Q14201 252 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 MSRB3Q8IXL7 192 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 KLHL23Q8NBE8 558 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 PYCR2Q96C36 320 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 NODALQ96S42 347 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 BARD1Q99728 777 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 OSBPL10Q9BXB5 764 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 PARVBQ9HBI1 364 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 LRTM1Q9HBL6 345 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 CRLS1Q9UJA2 301 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
RAPGEF3-219ENST00000549151 H3BNC9 293 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 ARNTLO00327 626 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 COCHO43405 550 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 CREG1O75629 220 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 NPPAP01160 153 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 ALDH2P05091 517 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 RGS4P49798 205 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 RGS21Q2M5E4 152 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 CES5AQ6NT32 575 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 IGFN1Q86VF2 1251 aa11.68□□□□□ -0.54
RAPGEF3-219ENST00000549151 ABHD11Q8NFV4 315 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms