RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 MDH1P40925 334 aaKnown RBP28.07■■■□□ 2.08
BRF1-213ENST00000548421 HALP42357 657 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 RPIAP49247 311 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 ELOCQ15369 112 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 ABRAXAS1Q6UWZ7 409 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 TAF8Q7Z7C8 310 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 NUDCD3Q8IVD9 361 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 C10orf107Q8IVU9 208 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 MCOLN3Q8TDD5 553 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 LOXL4Q96JB6 756 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 C12orf66Q96MD2 445 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 LRFN3Q9BTN0 628 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 OXSMQ9NWU1 459 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 CD274Q9NZQ7 290 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 SPASTQ9UBP0 616 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 ASF1AQ9Y294 204 aa28.07■■■□□ 2.08
BRF1-213ENST00000548421 ARHGEF17Q96PE2 2063 aaPredicted RBP28.07■■■□□ 2.08
BRF1-213ENST00000548421 DMDP11532 3685 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 LAMA1P25391 3075 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 DNAH14Q0VDD8 3507 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 NEMP2A6NFY4 417 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 RPN2P04844 631 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 CELA2BP08218 269 aaPredicted RBP28.06■■■□□ 2.08
BRF1-213ENST00000548421 HIST1H2AGP0C0S8 130 aaPredicted RBP28.06■■■□□ 2.08
BRF1-213ENST00000548421 GFAPP14136 432 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 HIST1H2ADP20671 130 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 NFKB2Q00653 900 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 BNC1Q01954 994 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 GUCY1A3Q02108 690 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 C1orf61Q13536 156 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 CLCA4Q14CN2 919 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 SLC22A9Q8IVM8 553 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 FBXO15Q8NCQ5 510 aaPredicted RBP28.06■■■□□ 2.08
BRF1-213ENST00000548421 SREK1Q8WXA9 508 aaKnown RBP28.06■■■□□ 2.08
BRF1-213ENST00000548421 HIST1H2AHQ96KK5 128 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 INSM2Q96T92 566 aaPredicted RBP28.06■■■□□ 2.08
BRF1-213ENST00000548421 HIST1H2AJQ99878 128 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 H2AFJQ9BTM1 129 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 TAAR2Q9P1P5 351 aa28.06■■■□□ 2.08
BRF1-213ENST00000548421 A6NCN8 305 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 NCF1BA6NI72 391 aaPredicted RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 A8MT66 165 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 NCF1CA8MVU1 366 aaPredicted RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 S100BP04271 92 aaPredicted RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 F3P13726 295 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 NCF1P14598 390 aaPredicted RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 BDKRB1P46663 353 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 AP1S2P56377 157 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 CDKL1Q00532 357 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 FBXO39Q8N4B4 442 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 PDPRQ8NCN5 879 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 MAGEC3Q8TD91 643 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 ARL15Q9NXU5 204 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 SIRPGQ9P1W8 387 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 RAB23Q9ULC3 237 aa28.05■■■□□ 2.08
BRF1-213ENST00000548421 CFAP20Q9Y6A4 193 aaKnown RBP28.05■■■□□ 2.08
BRF1-213ENST00000548421 KLK8O60259 260 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 IPO13O94829 963 aaKnown RBP28.04■■■□□ 2.08
BRF1-213ENST00000548421 EPN2O95208 641 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 GUCA1CO95843 209 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 CFIP05156 583 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 NEFHP12036 1026 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 PFKFB4Q16877 469 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 CDKL4Q5MAI5 379 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 PRAMEF14Q5SWL7 426 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 LIPMQ5VYY2 423 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 GKN2Q86XP6 184 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 OR5K2Q8NHB8 316 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 LMX1AQ8TE12 382 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 ELF4Q99607 663 aaPredicted RBP28.04■■■□□ 2.08
BRF1-213ENST00000548421 PRRX2Q99811 253 aa28.04■■■□□ 2.08
BRF1-213ENST00000548421 EML2O95834 649 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 RPE65Q16518 533 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 PDK4Q16654 411 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 TTC23LQ6PF05 361 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 DCUN1D3Q8IWE4 304 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 SDR16C5Q8N3Y7 309 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 PTGR2Q8N8N7 351 aaPredicted RBP28.03■■■□□ 2.08
BRF1-213ENST00000548421 ZNF548Q8NEK5 533 aaPredicted RBP28.03■■■□□ 2.08
BRF1-213ENST00000548421 CKAP2Q8WWK9 683 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 PHF21BQ96EK2 531 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 EGFL8Q99944 293 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 TRIT1Q9H3H1 467 aaKnown RBP28.03■■■□□ 2.08
BRF1-213ENST00000548421 IMP3Q9NV31 184 aaKnown RBP28.03■■■□□ 2.08
BRF1-213ENST00000548421 SCHIP1Q9P0W5 487 aaPredicted RBP28.03■■■□□ 2.08
BRF1-213ENST00000548421 HEBP2Q9Y5Z4 205 aa28.03■■■□□ 2.08
BRF1-213ENST00000548421 OR52A4PA6NMU1 304 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 AQP9O43315 295 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 TRIM13O60858 407 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 PIAS2O75928 621 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 ANXA5P08758 320 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 MTHFD1P11586 935 aaKnown RBP28.02■■■□□ 2.08
BRF1-213ENST00000548421 ARRB1P49407 418 aaPredicted RBP28.02■■■□□ 2.08
BRF1-213ENST00000548421 PRKAA2P54646 552 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 ALDH18A1P54886 795 aaKnown RBP28.02■■■□□ 2.08
BRF1-213ENST00000548421 DNAJB13P59910 316 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 ASPHQ12797 758 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 GRIK2Q13002 908 aa28.02■■■□□ 2.08
BRF1-213ENST00000548421 SLC23A3Q6PIS1 610 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms