RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 IARS2Q9NSE4 1012 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 ACSL6Q9UKU0 697 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 KPNA5O15131 536 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 ERVK-10P10266 1014 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 PKMP14618 531 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 POLR2CP19387 275 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 MC2RQ01718 297 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 CKAP4Q07065 602 aaKnown RBP18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 ABRQ12979 859 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 ARMC6Q6NXE6 501 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 BBOF1Q8ND07 529 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 OR5K2Q8NHB8 316 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 KCNE4Q8WWG9 221 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 KLHL6Q8WZ60 621 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 LRRC39Q96DD0 335 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 MAP3K3Q99759 626 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 FAM167BQ9BTA0 163 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 XKR8Q9H6D3 395 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 PLAC1Q9HBJ0 212 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 SEMA5BQ9P283 1151 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 FBXO5Q9UKT4 447 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 CHMP2BQ9UQN3 213 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 PCDHGA3Q9Y5H0 932 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 B3GALT1Q9Y5Z6 326 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 TEX264Q9Y6I9 313 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 ZFHX4Q86UP3 3567 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 AHCTF1Q8WYP5 2266 aa18.2■□□□□ 0.5
PRPF40B-206ENST00000547764 IGHV5-51A0A0C4DH38 117 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 BTN3A3O00478 584 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 NDC80O14777 642 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 TPBGLP0DKB5 382 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 CHRM3P20309 590 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 MPP1Q00013 466 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 DNTTIP2Q5QJE6 756 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 PLEKHS1Q5SXH7 462 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 ANKS6Q68DC2 871 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 DUPD1Q68J44 220 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 C19orf48Q6RUI8 117 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 UNC5AQ6ZN44 842 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 AMIGO1Q86WK6 493 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 SPACA3Q8IXA5 215 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 CFAP61Q8NHU2 1237 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 FAM136AQ96C01 138 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 CFAP36Q96G28 342 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 CD180Q99467 661 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 CTRCQ99895 268 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 DDA1Q9BW61 102 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 FBXO8Q9NRD0 319 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 SIDT1Q9NXL6 827 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 WHRNQ9P202 907 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 GALPQ9UBC7 116 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 ZC3H7BQ9UGR2 993 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 POLG2Q9UHN1 485 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 ICKQ9UPZ9 632 aa18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 TDRKHQ9Y2W6 561 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 DSPP15924 2871 aaKnown RBP18.19■□□□□ 0.5
PRPF40B-206ENST00000547764 TLCD2A6NGC4 264 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 BTN3A1O00481 513 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 KRT37O76014 449 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 HAUS5O94927 633 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 KPNA2P52292 529 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 RAB15P59190 212 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 SH3BP2P78314 561 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 PDIA2Q13087 525 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 PRKAA1Q13131 559 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 CALCOCO2Q13137 446 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 DCAF12Q5T6F0 453 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 ZNF549Q6P9A3 640 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 ZFAND4Q86XD8 727 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 GSDMBQ8TAX9 411 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 UBXN4Q92575 508 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 ASPSCR1Q9BZE9 553 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 DPH1Q9BZG8 443 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 APMAPQ9HDC9 416 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 LATS2Q9NRM7 1088 aa18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 UTP11Q9Y3A2 253 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-206ENST00000547764 GSAPA4D1B5 854 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 E5RI56 91 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 E7ESA3 106 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 KLK10O43240 276 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 TUBB4AP04350 444 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 NELFEP18615 380 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CD82P27701 267 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 ABCG1P45844 678 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 TLE3Q04726 772 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CBLBQ13191 982 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CLN3Q13286 438 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 GBX1Q14549 363 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 FASTKD3Q14CZ7 662 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 WHAMMP3Q1A5X7 153 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 STEAP4Q687X5 459 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CNSTQ6PJW8 725 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 UNC5DQ6UXZ4 953 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 ADGRF3Q8IZF5 1079 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 ZBTB2Q8N680 514 aa18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 C2CD4AQ8NCU7 369 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 SKA2Q8WVK7 121 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-206ENST00000547764 CERS2Q96G23 380 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms