RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 CCL21O00585 134 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 MTHFD1P11586 935 aaKnown RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 CDH3P22223 829 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 CTNNA2P26232 953 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 SERPINB6P35237 376 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 NIPAL4Q0D2K0 466 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 TMEM115Q12893 351 aaPredicted RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 GALNT3Q14435 633 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 ODF2Q5BJF6 829 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 LRRC38Q5VT99 294 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 XKRXQ6PP77 449 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 FAM83HQ6ZRV2 1179 aaPredicted RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 NT5DC3Q86UY8 548 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 KATNAL2Q8IYT4 538 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 KCTD6Q8NC69 237 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 RAPGEF5Q92565 580 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 MAML1Q92585 1016 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 NACC2Q96BF6 587 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 CNDP1Q96KN2 507 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 VPS35Q96QK1 796 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 ADGRE3Q9BY15 652 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 C1GALT1Q9NS00 363 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 IMP3Q9NV31 184 aaKnown RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 HAUS2Q9NVX0 235 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 DDX56Q9NY93 547 aaKnown RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 GPN3Q9UHW5 284 aaPredicted RBP8.96□□□□□ -0.98
SSH1-205ENST00000546812 SLC24A2Q9UI40 661 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 AMFRQ9UKV5 643 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 POMT2Q9UKY4 750 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 TMPRSS11EQ9UL52 423 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 PSMD13Q9UNM6 376 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 TTLL3Q9Y4R7 772 aa8.96□□□□□ -0.98
SSH1-205ENST00000546812 CCDC78A2IDD5 438 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 C3orf70A6NLC5 250 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 MATN3O15232 486 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 MAP3K7O43318 606 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 MFSD11O43934 449 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 POP7O75817 140 aaKnown RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 NADKO95544 446 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 UMODP07911 640 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 CBSLP0DN79 551 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 POLR2CP19387 275 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 KDELR1P24390 212 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 CBSP35520 551 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 PRKAA1Q13131 559 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 XRCC4Q13426 336 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 GTF2H3Q13889 308 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 PDK2Q15119 407 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 PRKD1Q15139 912 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 PRAMEF13Q5VWM6 474 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 METRNLQ641Q3 311 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 TMEM207Q6UWW9 146 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 TMC3Q7Z5M5 1100 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 CCDC50Q8IVM0 306 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 BRSK1Q8TDC3 778 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 ALG3Q92685 438 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 FATE1Q969F0 183 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 RNF25Q96BH1 459 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 TTC25Q96NG3 672 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 INSM2Q96T92 566 aaPredicted RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 TRIM56Q9BRZ2 755 aaKnown RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 ZNF670Q9BS34 389 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 EPS8L2Q9H6S3 715 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 KIR3DX1Q9H7L2 352 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 MCCC2Q9HCC0 563 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 FBXL4Q9UKA2 621 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 SHOC2Q9UQ13 582 aa8.95□□□□□ -0.98
SSH1-205ENST00000546812 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.95□□□□□ -0.98
SSH1-205ENST00000546812 CFAP20Q9Y6A4 193 aaKnown RBP8.95□□□□□ -0.98
SSH1-205ENST00000546812 CCDC66A2RUB6 948 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 GOLGA6L9A6NEM1 432 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 MIF4GDA9UHW6 222 aaKnown RBP8.94□□□□□ -0.98
SSH1-205ENST00000546812 C19orf84I3L1E1 186 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 MATN2O00339 956 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 CNOT3O75175 753 aaKnown RBP8.94□□□□□ -0.98
SSH1-205ENST00000546812 FAM155BO75949 473 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 MMP2P08253 660 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 CD99P14209 185 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 AGAP20933 346 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 CD86P42081 329 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 CDKN2BP42772 138 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 CA7P43166 264 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 KIR3DL1P43629 444 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 FOXL2P58012 376 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 DYNLT1P63172 113 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 DCDP81605 110 aaKnown RBP8.94□□□□□ -0.98
SSH1-205ENST00000546812 GALNT2Q10471 571 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 NFE2L1Q14494 772 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.94□□□□□ -0.98
SSH1-205ENST00000546812 ATP13A5Q4VNC0 1218 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 C1orf189Q5VU69 101 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 IRAK1BP1Q5VVH5 260 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 NCBP2-AS2Q69YL0 99 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 TIGD7Q6NT04 549 aaPredicted RBP8.94□□□□□ -0.98
SSH1-205ENST00000546812 RHBDD2Q6NTF9 364 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 AADACL2Q6P093 401 aa8.94□□□□□ -0.98
SSH1-205ENST00000546812 MRPL14Q6P1L8 145 aaKnown RBP8.94□□□□□ -0.98
SSH1-205ENST00000546812 MFSD7Q6UXD7 560 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms