RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NAE1Q13564 534 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 AP5B1Q2VPB7 878 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PAGE3Q5JUK9 113 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 RD3Q7Z3Z2 195 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 TECPR1Q7Z6L1 1165 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ANKRD46Q86W74 232 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 FBXW8Q8N3Y1 598 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 HDDC3Q8N4P3 179 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 MRPL1Q9BYD6 325 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 CD244Q9BZW8 370 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SEMA6AQ9H2E6 1030 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 STN1Q9H668 368 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PTBP2Q9UKA9 531 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF490Q9ULM2 529 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SH2B3Q9UQQ2 575 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PLXNB3Q9ULL4 1909 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ZFC3H1O60293 1989 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PRORSD1PA6NEY8 169 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ARHGEF33A8MVX0 844 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 MRASO14807 208 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 TPST1O60507 370 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 STK16O75716 305 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 NCK1P16333 377 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 GPX3P22352 226 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 DRD3P35462 400 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SLC7A2P52569 658 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SATB1Q01826 763 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PTK2BQ14289 1009 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 INPP5AQ14642 412 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 IL23RQ5VWK5 629 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 METTL21CQ5VZV1 264 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 SLC2A7Q6PXP3 512 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 FAM83HQ6ZRV2 1179 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 CHST15Q7LFX5 561 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 RALGPS2Q86X27 583 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 ZNF547Q8IVP9 402 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 KBTBD2Q8IY47 623 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 AFAP1L2Q8N4X5 818 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 BHLHE22Q8NFJ8 381 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 OR14C36Q8NHC7 312 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 RP9Q8TA86 221 aaKnown RBP11.69□□□□□ -0.54
CCDC38-202ENST00000546386 NUS1Q96E22 293 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 GDF15Q99988 308 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 OSGEPL1Q9H4B0 414 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 KCTD5Q9NXV2 234 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PPIL1Q9Y3C6 166 aa11.69□□□□□ -0.54
CCDC38-202ENST00000546386 PRNPP04156 253 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 HIST1H2AGP0C0S8 130 aaPredicted RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 HIST1H2ADP20671 130 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 CCND1P24385 295 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 VARSP26640 1264 aaKnown RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 TAS2R38P59533 333 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 STX1BP61266 288 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 ANKRD26P1Q6NSI1 321 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 CBARPQ8N350 705 aaPredicted RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 TMEM159Q96B96 161 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 HIST1H2AHQ96KK5 128 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 HIST1H2AJQ99878 128 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 RTKNQ9BST9 563 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 H2AFJQ9BTM1 129 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 SLC2A11Q9BYW1 496 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 EFCAB1Q9HAE3 211 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 GDE1Q9NZC3 331 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 SLC27A6Q9Y2P4 619 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 OARD1Q9Y530 152 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 PCDHGA7Q9Y5G6 932 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 K7EQS6 105 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 AKAP10O43572 662 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 NARSO43776 548 aaKnown RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 SEC22BO75396 215 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 EGFP01133 1207 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 FUCA1P04066 466 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 GSNP06396 782 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 EPB42P16452 691 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 LBPP18428 481 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 CASP9P55211 416 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 CLDN2P57739 230 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 DMC1Q14565 340 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 ATP6AP1LQ52LC2 224 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
CCDC38-202ENST00000546386 DPPA4Q7L190 304 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 HEATR4Q86WZ0 1026 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 ACTRT2Q8TDY3 377 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 ASB11Q8WXH4 323 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 PPM1MQ96MI6 270 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
CCDC38-202ENST00000546386 EDDM13A0A1B0GTR0 161 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 E7EQ34 232 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 PDYNP01213 254 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 ANXA5P08758 320 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 UROSP10746 265 aa11.67□□□□□ -0.54
CCDC38-202ENST00000546386 HOXB8P17481 243 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms