RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LCN9Q8WX39 176 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ULK4Q96C45 1275 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 C19orf60Q96EN9 201 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 RBM41Q96IZ5 413 aaKnown RBP12.15□□□□□ -0.46
COPS7A-221ENST00000546229 SPATA13Q96N96 652 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 RANBP9Q96S59 729 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 COPS8Q99627 209 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 DPH2Q9BQC3 489 aaPredicted RBP12.15□□□□□ -0.46
COPS7A-221ENST00000546229 HGH1Q9BTY7 390 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 MENTQ9BUN1 341 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 HEMGNQ9BXL5 484 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 KLHL25Q9H0H3 589 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 XKR8Q9H6D3 395 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 MVB12BQ9H7P6 319 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 GPR83Q9NYM4 423 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 CRLS1Q9UJA2 301 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ERRFI1Q9UJM3 462 aaPredicted RBP12.15□□□□□ -0.46
COPS7A-221ENST00000546229 EFR3BQ9Y2G0 817 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 NTNG1Q9Y2I2 539 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 COLEC10Q9Y6Z7 277 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ANKRD12Q6UB98 2062 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 GSAPA4D1B5 854 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 MASP2O00187 686 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ZNF185O15231 689 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ZNF749O43361 778 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 KRT86O43790 486 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CBX6O95503 412 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 TPM3P06753 285 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 UMODP07911 640 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CBSLP0DN79 551 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CYP2A7P20853 494 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 MC4RP32245 332 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CBSP35520 551 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 RPA4Q13156 261 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 DBN1Q16643 649 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 DEFB110Q30KQ9 67 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 PLEKHN1Q494U1 663 aaPredicted RBP12.14□□□□□ -0.47
COPS7A-221ENST00000546229 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 VWA5B1Q5TIE3 1220 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 RHBDD2Q6NTF9 364 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ARMC6Q6NXE6 501 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
COPS7A-221ENST00000546229 PPP1R32Q7Z5V6 425 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 AMIGO1Q86WK6 493 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CLDN19Q8N6F1 224 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CCDC110Q8TBZ0 833 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ALG3Q92685 438 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 SNRNP40Q96DI7 357 aaKnown RBP12.14□□□□□ -0.47
COPS7A-221ENST00000546229 CLIP3Q96DZ5 547 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 OR2A14Q96R47 310 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 DHRS4Q9BTZ2 278 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 SLC22A11Q9NSA0 550 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 ZNHIT6Q9NWK9 470 aaKnown RBP12.14□□□□□ -0.47
COPS7A-221ENST00000546229 SPHK1Q9NYA1 384 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 PRSS21Q9Y6M0 314 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 APCP25054 2843 aa12.14□□□□□ -0.47
COPS7A-221ENST00000546229 DOCK10Q96BY6 2186 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 CROCCQ5TZA2 2017 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 CCDC66A2RUB6 948 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 E7EQ34 232 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 CBFA2T2O43439 604 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 CRTAMO95727 393 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 UGT2B7P16662 529 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 ITGALP20701 1170 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 SOX8P57073 446 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 COPS2P61201 443 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 PRKAA1Q13131 559 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 RAPSNQ13702 412 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 SPARCL1Q14515 664 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
COPS7A-221ENST00000546229 AADACL2Q6P093 401 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 PHC3Q8NDX5 983 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 OR5AR1Q8NGP9 310 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
COPS7A-221ENST00000546229 ZBTB20Q9HC78 741 aaPredicted RBP12.13□□□□□ -0.47
COPS7A-221ENST00000546229 ENAMQ9NRM1 1142 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
COPS7A-221ENST00000546229 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 AAR2Q9Y312 384 aaKnown RBP12.13□□□□□ -0.47
COPS7A-221ENST00000546229 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
COPS7A-221ENST00000546229 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
COPS7A-221ENST00000546229 A1L4Q6 167 aa12.12□□□□□ -0.47
COPS7A-221ENST00000546229 A6NL46 340 aa12.12□□□□□ -0.47
COPS7A-221ENST00000546229 C2orf74A8MZ97 194 aa12.12□□□□□ -0.47
COPS7A-221ENST00000546229 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
COPS7A-221ENST00000546229 H7C0C1 242 aa12.12□□□□□ -0.47
COPS7A-221ENST00000546229 E2F3O00716 465 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms