RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CSF2RBP32927 897 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CBSP35520 551 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 PRKG2Q13237 762 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 PLCL1Q15111 1095 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 GRTP1Q5TC63 336 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 WDR93Q6P2C0 686 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 PAQR3Q6TCH7 311 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 NEK10Q6ZWH5 1172 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 USP53Q70EK8 1073 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CPNE9Q8IYJ1 553 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CFAP61Q8NHU2 1237 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 SKA2Q8WVK7 121 aaPredicted RBP19.93■□□□□ 0.78
HMGA2-211ENST00000545998 JPH3Q8WXH2 748 aaPredicted RBP19.93■□□□□ 0.78
HMGA2-211ENST00000545998 NUDT22Q9BRQ3 303 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 HGH1Q9BTY7 390 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 RDH14Q9HBH5 336 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 CLCA2Q9UQC9 943 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 RUVBL2Q9Y230 463 aaKnown RBP19.93■□□□□ 0.78
HMGA2-211ENST00000545998 MTO1Q9Y2Z2 717 aaKnown RBP19.93■□□□□ 0.78
HMGA2-211ENST00000545998 NFS1Q9Y697 457 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 FREM2Q5SZK8 3169 aa19.93■□□□□ 0.78
HMGA2-211ENST00000545998 KIF26BQ2KJY2 2108 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 EIF3FO00303 357 aaPredicted RBP19.92■□□□□ 0.78
HMGA2-211ENST00000545998 PROS1P07225 676 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 ABHD2P08910 425 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 ENO3P13929 434 aaPredicted RBP19.92■□□□□ 0.78
HMGA2-211ENST00000545998 MAPK9P45984 424 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 PDX1P52945 283 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 PGGT1BP53609 377 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 LIMK2P53671 638 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 CYHR1Q6ZMK1 362 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 OR52E1Q8NGJ3 308 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 GPR22Q99680 433 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 TFB2MQ9H5Q4 396 aaKnown RBP19.92■□□□□ 0.78
HMGA2-211ENST00000545998 POLG2Q9UHN1 485 aa19.92■□□□□ 0.78
HMGA2-211ENST00000545998 TSR3Q9UJK0 312 aaKnown RBP19.92■□□□□ 0.78
HMGA2-211ENST00000545998 A0A087WUV0 522 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 RIPK2O43353 540 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 JUPP14923 745 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 TYRP1P17643 537 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 SPRP35270 261 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 TAS2R39P59534 338 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 PDAP1Q13442 181 aaKnown RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 MAP9Q49MG5 647 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 WDR74Q6RFH5 385 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 ZNF574Q6ZN55 896 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 NCSTNQ92542 709 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 RSC1A1Q92681 617 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 FOPNLQ96NB1 174 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 DEPDC7Q96QD5 511 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 DPYSL5Q9BPU6 564 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 EPB41L4BQ9H329 900 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 FRYQ5TBA9 3013 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 ANKRD12Q6UB98 2062 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 MED19A0JLT2 244 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 FAM149AA5PLN7 773 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 FAM221BA6H8Z2 402 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 C1orf105O95561 183 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 RPN2P04844 631 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 TPBGLP0DKB5 382 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 MPC1LP0DKB6 136 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 HOXB3P14651 431 aaPredicted RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 AMD1P17707 334 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 SAT1P21673 171 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 CAPZBP47756 277 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 POU4F1Q01851 419 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 MARCH9Q86YJ5 346 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 CEP97Q8IW35 865 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 SLITRK4Q8IW52 837 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 DCUN1D3Q8IWE4 304 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 UHMK1Q8TAS1 419 aaKnown RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 EEF1AKMT1Q8WVE0 214 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 LCN9Q8WX39 176 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 NRTNQ99748 197 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 TMEM9Q9P0T7 183 aa19.91■□□□□ 0.78
HMGA2-211ENST00000545998 TDRKHQ9Y2W6 561 aaKnown RBP19.91■□□□□ 0.78
HMGA2-211ENST00000545998 CSO75390 466 aaKnown RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 PSIP1O75475 530 aaKnown RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 TSPAN12O95859 305 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 PPM1FP49593 454 aaPredicted RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 RGS4P49798 205 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 ZFP36L1Q07352 338 aaKnown RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 TARDBPQ13148 414 aaKnown RBP eCLIP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 GRB7Q14451 532 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 ISXQ2M1V0 245 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 LRRC8EQ6NSJ5 796 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 TMEM71Q6P5X7 295 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 TMEM207Q6UWW9 146 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 PIWIL4Q7Z3Z4 852 aaKnown RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 B3GNT8Q7Z7M8 397 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 RASGRP3Q8IV61 690 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 OR4E2Q8NGC2 313 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 OR4D9Q8NGE8 314 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 SLC44A1Q8WWI5 657 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 MRRFQ96E11 262 aaKnown RBP19.9■□□□□ 0.78
HMGA2-211ENST00000545998 SCNM1Q9BWG6 230 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 POPDC3Q9HBV1 291 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 KLK13Q9UKR3 277 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 SLC39A10Q9ULF5 831 aa19.9■□□□□ 0.78
HMGA2-211ENST00000545998 ICKQ9UPZ9 632 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms