RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CASP10Q92851 521 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FUBP1Q96AE4 644 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PLD4Q96BZ4 506 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 HMCESQ96FZ2 354 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF419Q96HQ0 510 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 CDKN2AIPNLQ96HQ2 116 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TBATAQ96M53 351 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GLT1D1Q96MS3 346 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 RNF145Q96MT1 663 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PSKH2Q96QS6 385 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GAD1Q99259 594 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 RTP3Q9BQQ7 232 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 HGH1Q9BTY7 390 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ADGRE3Q9BY15 652 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SLC29A3Q9BZD2 475 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TRIT1Q9H3H1 467 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TUBB1Q9H4B7 451 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FBRSL1Q9HCM7 1045 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM30AQ9NV96 361 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FAM118AQ9NWS6 357 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 DNAJB12Q9NXW2 375 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 MARCH4Q9P2E8 410 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ST3GAL5Q9UNP4 418 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 BTRCQ9Y297 605 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SNX10Q9Y5X0 201 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 MYO18AQ92614 2054 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SBF1O95248 1867 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 A0A0U1RQF3 1178 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 A0A1B0GTW7 788 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ATP6AP2A0A1C7CYW4 349 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ELOVL7A1L3X0 281 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ASPDHA6ND91 283 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 OR6C75A6NL08 312 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 UPK1AO00322 258 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SYN3O14994 580 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 GSTA4O15217 222 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 RAD51BO15315 384 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ATP6AP2O75787 350 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 B3GAT3O94766 335 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SNAP29O95721 258 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 GLUD1P00367 558 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ALDH2P05091 517 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 LINC00032P0C843 101 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 COL6A1P12109 1028 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 LPOP22079 712 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 HRH2P25021 359 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 IL12AP29459 219 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CD40LGP29965 261 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 KCNC1P48547 511 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 RGS4P49798 205 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ARHGDIAP52565 204 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CDH13P55290 713 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TPD52P55327 224 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 HUNKP57058 714 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PPP2R2BQ00005 443 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CTBSQ01459 385 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DSC2Q02487 901 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 YWHAHQ04917 246 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PCDH1Q08174 1060 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TRAF2Q12933 501 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CAPRIN1Q14444 709 aaKnown RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SEMA3AQ14563 771 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 NDUFA5Q16718 116 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DPY19L1Q2PZI1 675 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TTLL9Q3SXZ7 439 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MS4A13Q5J8X5 152 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FGD3Q5JSP0 725 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FAM182AQ5T1J6 154 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PIK3R6Q5UE93 754 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF468Q5VIY5 522 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CACHD1Q5VU97 1274 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 XAF1Q6GPH4 301 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SULT1C3Q6IMI6 304 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 ERICH5Q6P6B1 374 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 CYP20A1Q6UW02 462 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 KDELC2Q7Z4H8 507 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 REC114Q7Z4M0 266 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 GPR149Q86SP6 731 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SYVN1Q86TM6 617 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FAM126BQ8IXS8 530 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 LGI2Q8N0V4 545 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SPARTQ8N0X7 666 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SCAIQ8N9R8 606 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FNDC5Q8NAU1 212 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PDZD8Q8NEN9 1154 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 OR2T12Q8NG77 320 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 DNAJB14Q8TBM8 379 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PROKR1Q8TCW9 393 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 C2orf15Q8WU43 125 aaKnown RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 STARD8Q92502 1023 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 SNX19Q92543 992 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 TMBIM1Q969X1 311 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 RMDN1Q96DB5 314 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 PABPC5Q96DU9 382 aaKnown RBP6.35□□□□□ -1.39
SNHG1-225ENST00000545920 MOCOSQ96EN8 888 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 FBXL20Q96IG2 436 aa6.35□□□□□ -1.39
SNHG1-225ENST00000545920 METTL2AQ96IZ6 378 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms