RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 TRIM42Q8IWZ5 723 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 PDPRQ8NCN5 879 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 SKA2Q8WVK7 121 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 SCYL1Q96KG9 808 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 RMDN2Q96LZ7 410 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 ALG9Q9H6U8 611 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 NCKIPSDQ9NZQ3 722 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 TMEM216Q9P0N5 145 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 SPATA7Q9P0W8 599 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 TAAR2Q9P1P5 351 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 COPG2Q9UBF2 871 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 KLF15Q9UIH9 416 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 RNF112Q9ULX5 631 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 PRKAB1Q9Y478 270 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 TNPO3Q9Y5L0 923 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 GOLGA4Q13439 2230 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 GPR179Q6PRD1 2367 aa15.63■□□□□ 0.09
PRPF40A-212ENST00000545856 STX16-NPEPL1H3BU86 382 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 MYO1CO00159 1063 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 STX16O14662 325 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SPAG7O75391 227 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 S100BP04271 92 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 CFIP05156 583 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ANXA6P08133 673 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ANXA5P08758 320 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ALPPL2P10696 532 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 MTHFD1P11586 935 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 XRCC1P18887 633 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ATP5F1P24539 256 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 PDHA2P29803 388 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 HPDP32754 393 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 TGFBIQ15582 683 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 INAVAQ3KP66 663 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 VRK3Q8IV63 474 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 PRSS33Q8NF86 280 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 PTERQ96BW5 349 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 CCDC138Q96M89 665 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 FAM111AQ96PZ2 611 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SELENOSQ9BQE4 189 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 WWP1Q9H0M0 922 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 UCK1Q9HA47 277 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 TBC1D29Q9UFV1 150 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 EMCNQ9ULC0 261 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 DOLKQ9UPQ8 538 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ASF1AQ9Y294 204 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 PCDHGB2Q9Y5G2 931 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 R4GN57 208 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ARID1BQ8NFD5 2236 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 FAM221BA6H8Z2 402 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 NPEPPSL1A6NEC2 478 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SCAMP1O15126 338 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 FFAR2O15552 330 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 PCDHGA12O60330 932 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 C1orf105O95561 183 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 MYL2P10916 166 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 CREB1P16220 341 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SERPINB5P36952 375 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 RPIAP49247 311 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 DNAJB13P59910 316 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 BNC1Q01954 994 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 HHATQ5VTY9 493 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SULT1C3Q6IMI6 304 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 IYDQ6PHW0 289 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 OGFOD3Q6PK18 319 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SLC30A9Q6PML9 568 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 LAYNQ6UX15 382 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 ZYG11AQ6WRX3 759 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 KIRREL3Q8IZU9 778 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SFRP1Q8N474 314 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 TMEM151AQ8N4L1 468 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 LILRA3Q8N6C8 439 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 CCDC63Q8NA47 563 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 OR6C4Q8NGE1 309 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 UBTD2Q8WUN7 234 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 NAT14Q8WUY8 206 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 SH3KBP1Q96B97 665 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 C12orf66Q96MD2 445 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 C1QTNF3Q9BXJ4 246 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 KIR3DX1Q9H7L2 352 aa15.62■□□□□ 0.09
PRPF40A-212ENST00000545856 FOXO6A8MYZ6 492 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 TK2O00142 265 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 CDC7O00311 574 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 SNX2O60749 519 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 ZNF806P0C7X5 589 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 CPA3P15088 417 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 CCND1P24385 295 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 AK4P27144 223 aaPredicted RBP15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 OAS2P29728 719 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 GGT5P36269 586 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 FASLGP48023 281 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 GLRBP48167 497 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 SERPINB4P48594 390 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 PIK3CGP48736 1102 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 ALDH18A1P54886 795 aaKnown RBP15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 IL9RQ01113 521 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 OR4D1Q15615 310 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 RPE65Q16518 533 aa15.61■□□□□ 0.09
PRPF40A-212ENST00000545856 HLA-BQ31612 363 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms