RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ELNP15502 786 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 TIE1P35590 1138 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 CDH12P55289 794 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 KLF1Q13351 362 aaPredicted RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 PPIGQ13427 754 aaKnown RBP eCLIP12.31□□□□□ -0.445e-7■■■■■ 32.2
COL4A6-209ENST00000545689 PQLC3Q8N755 202 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 ENDOVQ8N8Q3 282 aaKnown RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 SLC35G5Q96KT7 338 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 TMEM248Q9NWD8 314 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 OR2AG2A6NM03 316 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 OR5F1O95221 314 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 SLC35G6P0C7Q6 338 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 DMPKQ09013 629 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 IL18R1Q13478 541 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 MYBPC3Q14896 1274 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 TMEM220Q6QAJ8 160 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 PLET1Q6UQ28 207 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 LAPTM4BQ86VI4 370 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 ERI1Q8IV48 349 aaKnown RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 ARL14EPQ8N8R7 260 aaPredicted RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 EXOSC8Q96B26 276 aaKnown RBP12.31□□□□□ -0.44
COL4A6-209ENST00000545689 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 CRELD1Q96HD1 420 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 DEFB118Q96PH6 123 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 DHRS7Q9Y394 339 aa12.31□□□□□ -0.44
COL4A6-209ENST00000545689 TBX10O75333 385 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PGRP06401 933 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 DGKGP49619 791 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 GALK1P51570 392 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SP140Q13342 867 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 GALNT15Q8N3T1 639 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TSPEARQ8WU66 669 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 OVCA2Q8WZ82 227 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SMG7Q92540 1137 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 FCRL4Q96PJ5 515 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TSGA13Q96PP4 275 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 EURLQ9NYK6 297 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 HS3ST4Q9Y661 456 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 C9P02748 559 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 DNAJA1P31689 397 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MAGEA11P43364 429 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 AP3S2P59780 193 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PAQR3Q6TCH7 311 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MBOAT1Q6ZNC8 495 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 LINC00471Q8N535 108 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 C2CD4AQ8NCU7 369 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 GPR88Q9GZN0 384 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SLC32A1Q9H598 525 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 CKLFQ9UBR5 152 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PTBP2Q9UKA9 531 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 COQ6Q9Y2Z9 468 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 BHMG1C9JSJ3 638 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MATN2O00339 956 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TYROBPO43914 113 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 CSKP41240 450 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MYBPC1Q00872 1141 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MSS51Q4VC12 460 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PEX13Q92968 403 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 KLHL32Q96NJ5 620 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SPATA31D3P0C874 917 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 GRIA1P42261 906 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF155Q12901 538 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PCLAFQ15004 111 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SPATA31D4Q6ZUB0 917 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 OR13C4Q8NGS5 318 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 EBPLQ9BY08 206 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 MINDY3Q9H8M7 445 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TMEM138Q9NPI0 162 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TAS2R7Q9NYW3 318 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 RPL36Q9Y3U8 105 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 NME6O75414 186 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 VIPP01282 170 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 PCCBP05166 539 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 VARSP26640 1264 aaKnown RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 ZBTB6Q15916 424 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 ZBED5Q49AG3 693 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 FAM171BQ6P995 826 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.3□□□□□ -0.44
COL4A6-209ENST00000545689 HPS1Q92902 700 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 TMCO6Q96DC7 493 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 CGREF1Q99674 301 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 ZSCAN5AQ9BUG6 496 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
COL4A6-209ENST00000545689 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 BCAS2O75934 225 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 C8BP07358 591 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms