RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SARM1Q6SZW1 724 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SNX20Q7Z614 316 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SYVN1Q86TM6 617 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CDKL3Q8IVW4 592 aaPredicted RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 KLHDC8BQ8IXV7 354 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CCDC170Q8IYT3 715 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CARFQ8N187 725 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ACVR1CQ8NER5 493 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 OR8K5Q8NH50 307 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 OR1L3Q8NH93 324 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 HM13Q8TCT9 377 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 LCN9Q8WX39 176 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 THAP4Q8WY91 577 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ANP32BQ92688 251 aaKnown RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 ULK4Q96C45 1275 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 DNAJC1Q96KC8 554 aaKnown RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 SPATA13Q96N96 652 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 CITED4Q96RK1 184 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 COPS8Q99627 209 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 TBL1YQ9BQ87 522 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 RBCK1Q9BYM8 510 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 TRIM5Q9C035 493 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SAP130Q9H0E3 1048 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 OR52A5Q9H2C5 316 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 COG4Q9H9E3 785 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ARNT2Q9HBZ2 717 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 LATS2Q9NRM7 1088 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 C1GALT1Q9NS00 363 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 SOHLH2Q9NX45 425 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ZDHHC3Q9NYG2 299 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 POMT2Q9UKY4 750 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 EFR3BQ9Y2G0 817 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 EPN1Q9Y6I3 576 aaPredicted RBP8.22□□□□□ -1.09
USP28-215ENST00000545608 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
USP28-215ENST00000545608 ZNF106Q9H2Y7 1883 aaKnown RBP8.21□□□□□ -1.09
USP28-215ENST00000545608 IGLV3-16A0A075B6K0 115 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 TRBV5-4A0A0C4DH59 114 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 GSAPA4D1B5 854 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 BTN3A1O00481 513 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 METTL18O95568 372 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 KLK3P07288 261 aaPredicted RBP8.21□□□□□ -1.1
USP28-215ENST00000545608 CAPN1P07384 714 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PVRP15151 417 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ST6GAL1P15907 406 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PTPN7P35236 360 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 RORAP35398 523 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 HADHAP40939 763 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PTGIRP43119 386 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PREPP48147 710 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 LMAN1P49257 510 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 NAP1L1P55209 391 aaKnown RBP8.21□□□□□ -1.1
USP28-215ENST00000545608 RWDD2BP57060 319 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PRKAA1Q13131 559 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PRKG2Q13237 762 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 GPR33Q49SQ1 333 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 NADK2Q4G0N4 442 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ZRANB3Q5FWF4 1079 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 COX20Q5RI15 118 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 IZUMO3Q5VZ72 239 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 KCTD11Q693B1 232 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 SERPINA9Q86WD7 417 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 DSELQ8IZU8 1212 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 FAM26EQ8N5C1 309 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ENDOVQ8N8Q3 282 aaKnown RBP8.21□□□□□ -1.1
USP28-215ENST00000545608 OR52E1Q8NGJ3 308 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ADAMTS17Q8TE56 1095 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 HEXDCQ8WVB3 486 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 SEC14L1Q92503 715 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 CPT1BQ92523 772 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ALG3Q92685 438 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 CLIP3Q96DZ5 547 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 LRFN5Q96NI6 719 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 TRAPPC9Q96Q05 1148 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 C19orf43Q9BQ61 176 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 FERMT1Q9BQL6 677 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 SLC25A23Q9BV35 468 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 LACRTQ9GZZ8 138 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 KLHL25Q9H0H3 589 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ING2Q9H160 280 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 SRMSQ9H3Y6 488 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 XKR8Q9H6D3 395 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 MLXIPLQ9NP71 852 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 ACSS2Q9NR19 701 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PCMTD2Q9NV79 361 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 REXO2Q9Y3B8 237 aaKnown RBP8.21□□□□□ -1.1
USP28-215ENST00000545608 HEBP2Q9Y5Z4 205 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 PRSS21Q9Y6M0 314 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 NAV2Q8IVL1 2488 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 BSNQ9UPA5 3926 aa8.21□□□□□ -1.1
USP28-215ENST00000545608 GRID2IPA4D2P6 1211 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 TMEM150CB9EJG8 249 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 H7C0S8 307 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 MATN2O00339 956 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 IFRD1O00458 451 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 STK10O94804 968 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 TJP3O95049 919 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 RAB40ALP0C0E4 278 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ACRV1P26436 265 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 UQCRFS1P47985 274 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms