RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TBC1D21Q8IYX1 336 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 BANPQ8N9N5 519 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 MCOLN3Q8TDD5 553 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
DDB1-223ENST00000543658 TCEAL3Q969E4 200 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 KIAA1191Q96A73 305 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 EGFL8Q99944 293 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 EDEM2Q9BV94 578 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
DDB1-223ENST00000543658 TFB2MQ9H5Q4 396 aaKnown RBP11.61□□□□□ -0.55
DDB1-223ENST00000543658 IGSF5Q9NSI5 407 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 SEMA4GQ9NTN9 838 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 POT1Q9NUX5 634 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 EVA1BQ9NVM1 165 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 NLGN3Q9NZ94 848 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 SIRPGQ9P1W8 387 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 GULP1Q9UBP9 304 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 PCOLCE2Q9UKZ9 415 aa11.61□□□□□ -0.55
DDB1-223ENST00000543658 TDRKHQ9Y2W6 561 aaKnown RBP11.61□□□□□ -0.55
DDB1-223ENST00000543658 CFAP20Q9Y6A4 193 aaKnown RBP11.61□□□□□ -0.55
DDB1-223ENST00000543658 TRBV23OR9-2A0A075B6M9 112 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 OR52A4PA6NMU1 304 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CDC7O00311 574 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TM9SF1O15321 606 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 YY2O15391 372 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 PRPF4O43172 522 aaKnown RBP eCLIP11.6□□□□□ -0.553e-7■□□□□ 8.7
DDB1-223ENST00000543658 SMIM24O75264 130 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 ZWINTO95229 277 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 MATN4O95460 622 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TSPAN12O95859 305 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CRHR1P34998 444 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 GMPRP36959 345 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 DLG1Q12959 904 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 PLCL1Q15111 1095 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TSNQ15631 228 aaKnown RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 RPE65Q16518 533 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CSRP2Q16527 193 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TECRLQ5HYJ1 363 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CAPRIN2Q6IMN6 1127 aaKnown RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 CLEC14AQ86T13 490 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 GATAD2AQ86YP4 633 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 GPSM1Q86YR5 675 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 PLD6Q8N2A8 252 aaKnown RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 ANKRD42Q8N9B4 389 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 OR5K2Q8NHB8 316 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 RHEBL1Q8TAI7 183 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TCP10LQ8TDR4 215 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 MRPL57Q9BQC6 102 aaKnown RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 HGH1Q9BTY7 390 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 MVB12BQ9H7P6 319 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 IL21RQ9HBE5 538 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 PARVBQ9HBI1 364 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 UCKL1Q9NWZ5 548 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CD274Q9NZQ7 290 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CPSF2Q9P2I0 782 aaKnown RBP11.6□□□□□ -0.55
DDB1-223ENST00000543658 XPR1Q9UBH6 696 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 TMCO1Q9UM00 188 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 OARD1Q9Y530 152 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
DDB1-223ENST00000543658 LNP1A1A4G5 178 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 PRR19A6NJB7 356 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ZNF839A8K0R7 811 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 KERAO60938 352 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 PSIP1O75475 530 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 C1orf105O95561 183 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 GUCA1CO95843 209 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 TOP3BO95985 862 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 ANXA5P08758 320 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ZNF883P0CG24 379 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 MYL2P10916 166 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 NEFHP12036 1026 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 GFAPP14136 432 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 NR1D1P20393 614 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ACADLP28330 430 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 RPIAP49247 311 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 AP1S2P56377 157 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 PPP2R2AP63151 447 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 HHEXQ03014 270 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 CLCA4Q14CN2 919 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 SF3A2Q15428 464 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 SHBQ15464 509 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 HHATQ5VTY9 493 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ZCCHC8Q6NZY4 707 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 DUS1LQ6P1R4 473 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 IYDQ6PHW0 289 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 CYHR1Q6ZMK1 362 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
DDB1-223ENST00000543658 NAGSQ8N159 534 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 PHC3Q8NDX5 983 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 OR5AR1Q8NGP9 310 aa11.59□□□□□ -0.55
DDB1-223ENST00000543658 OR2I1PQ8NGU4 316 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms