RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.29
PPME1-208ENST00000543525 FAF1Q9UNN5 650 aaPredicted RBP13.21□□□□□ -0.29
PPME1-208ENST00000543525 NEUROG3Q9Y4Z2 214 aa13.21□□□□□ -0.29
PPME1-208ENST00000543525 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 G3V2T6 193 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 K7ERQ8 282 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CLDN7O95471 211 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 ALPLP05186 524 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CBSLP0DN79 551 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 UGT1A1P22309 533 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 UGT1A4P22310 534 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 UGT1A3P35503 534 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 UGT1A5P35504 534 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CBSP35520 551 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 HNF1BP35680 557 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 PTPN5P54829 565 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 EMP3P54852 163 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CHRNA6Q15825 494 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 PHKG1Q16816 387 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 AAK1Q2M2I8 961 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.3
PPME1-208ENST00000543525 SGO1Q5FBB7 561 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 TTC23Q5W5X9 447 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 ZNF773Q6PK81 442 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 SVOPLQ8N434 492 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CLDN19Q8N6F1 224 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 TTC16Q8NEE8 873 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 ZNF548Q8NEK5 533 aaPredicted RBP13.21□□□□□ -0.3
PPME1-208ENST00000543525 OR52E4Q8NGH9 312 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 NUDT8Q8WV74 236 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 SLC47A1Q96FL8 570 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.3
PPME1-208ENST00000543525 IGSF21Q96ID5 467 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 MUS81Q96NY9 551 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 VN1R3Q9BXE9 311 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CLMPQ9H6B4 373 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 KCTD5Q9NXV2 234 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 LIMD1Q9UGP4 676 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 CDC14AQ9UNH5 594 aa13.21□□□□□ -0.3
PPME1-208ENST00000543525 LOC730098B7Z3J9 87 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 H0Y858 1186 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 GFRA2O00451 464 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 CXCR6O00574 342 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 STK16O75716 305 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 KRT6AP02538 564 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 KRT6BP04259 564 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 PGRP06401 933 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 BPIP17213 487 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 HOXB6P17509 224 aaKnown RBP13.2□□□□□ -0.3
PPME1-208ENST00000543525 CA5AP35218 305 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 GDF5P43026 501 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 KRT6CP48668 564 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 MYBPC3Q14896 1274 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 PTGR1Q14914 329 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 RUNDC3AQ59EK9 446 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
PPME1-208ENST00000543525 BROXQ5VW32 411 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 GPR107Q5VW38 600 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
PPME1-208ENST00000543525 RNF168Q8IYW5 571 aaPredicted RBP13.2□□□□□ -0.3
PPME1-208ENST00000543525 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 OR10A6Q8NH74 314 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 ACDQ96AP0 544 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 ATP13A3Q9H7F0 1226 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 TLR9Q9NR96 1032 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 C1orf109Q9NX04 203 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 KLHL42Q9P2K6 505 aa13.2□□□□□ -0.3
PPME1-208ENST00000543525 C16orf96A6NNT2 1141 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 GNGT2O14610 69 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 SCAMP3O14828 347 aaKnown RBP13.19□□□□□ -0.3
PPME1-208ENST00000543525 CLDN9O95484 217 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 IGSF6O95976 241 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 CST1P01037 141 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 ANXA5P08758 320 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 PCNAP12004 261 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
PPME1-208ENST00000543525 EEF1B2P24534 225 aaKnown RBP13.19□□□□□ -0.3
PPME1-208ENST00000543525 HMGCS1Q01581 520 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
PPME1-208ENST00000543525 CDKN3Q16667 212 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 SPANXN4Q5MJ08 99 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 ATG9BQ674R7 924 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 Q6ZNB5 142 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
PPME1-208ENST00000543525 MICU2Q8IYU8 434 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 RGL4Q8IZJ4 473 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 FAM9CQ8IZT9 166 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
PPME1-208ENST00000543525 C8orf59Q8N0T1 100 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms