RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 EHD1Q9H4M9 534 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 C8orf33Q9H7E9 229 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TPRKBQ9Y3C4 175 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PIAS3Q9Y6X2 628 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PEX12O00623 359 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 JMJD7P0C870 316 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DUSP3P51452 185 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TAS2R41P59536 307 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 NFATC2Q13469 925 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SERINC3Q13530 473 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CCINQ13939 588 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CHRNA6Q15825 494 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 FSTL4Q6MZW2 842 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 C11orf88Q6PI97 169 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMC8Q8IU68 726 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DHRSXQ8N5I4 330 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 GDPD5Q8WTR4 605 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TP53INP1Q96A56 240 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CDKN2AIPNLQ96HQ2 116 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TOX2Q96NM4 488 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM209Q96SK2 561 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 GPATCH1Q9BRR8 931 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PIMREGQ9BSJ6 248 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 MCOLN1Q9GZU1 580 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CD207Q9UJ71 328 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 A0A0G2JPF8 293 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 HNRNPCL3B7ZW38 293 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TGM5O43548 720 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM155BO75949 473 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CLDN7O95471 211 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CAPN1P07384 714 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 HNRNPCL4P0DMR1 293 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 MAGEA10P43363 369 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT2B15P54855 530 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TAS2R39P59534 338 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RPL26P61254 145 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 MRPS22P82650 360 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RING1Q06587 406 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 EPS8Q12929 822 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RUNX3Q13761 415 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RAB33AQ14088 237 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KPNB1Q14974 876 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC1A5Q15758 541 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 ETFRF1Q6IPR1 90 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 IZUMO2Q6UXV1 221 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM145Q8NBT3 493 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 GRIP2Q9C0E4 1043 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RPL26L1Q9UNX3 145 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DGKBQ9Y6T7 804 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM25EA8MYX2 175 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KMOO15229 486 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 STX11O75558 287 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PIM1P11309 404 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 MPSTP25325 297 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 IL1R2P27930 398 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 IL12BP29460 328 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CCKBRP32239 447 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PCYT1AP49585 367 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 ADRM1Q16186 407 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PPM1JQ5JR12 505 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DGKKQ5KSL6 1271 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRC66Q68CR7 880 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 THOC7Q6I9Y2 204 aaKnown RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RTL4Q6ZR62 310 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 DGLUCYQ7Z3D6 616 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC9B2Q86UD5 537 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 BHLHE22Q8NFJ8 381 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 ADCY4Q8NFM4 1077 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TWIST2Q8WVJ9 160 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM40Q8WWA1 233 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PMEPA1Q969W9 287 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 COG8Q96MW5 612 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KCNS3Q9BQ31 491 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 FAM83CQ9BQN1 747 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 CCM2Q9BSQ5 444 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM27Q9HBJ8 222 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TMEM248Q9NWD8 314 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 ADAM30Q9UKF2 790 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KCNK6Q9Y257 313 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 PLLPQ9Y342 182 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 TOPAZ1Q8N9V7 1692 aa6.78□□□□□ -1.32
SRGAP1-206ENST00000543397 KAT6AQ92794 2004 aa6.77□□□□□ -1.32
SRGAP1-206ENST00000543397 IGKV6-21A0A0C4DH24 114 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ZMPSTE24O75844 475 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 CNTN5O94779 1100 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC1A2P43004 574 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 PGDP52209 483 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 NRG1Q02297 640 aaPredicted RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 BNIP2Q12982 314 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 IL23RQ5VWK5 629 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 SPESP1Q6UW49 350 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ERN2Q76MJ5 926 aaKnown RBP6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 ULK2Q8IYT8 1036 aa6.77□□□□□ -1.33
SRGAP1-206ENST00000543397 OR10H5Q8NGA6 315 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms