RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FADS3Q9Y5Q0 445 aa5.07□□□□□ -1.6
CLIP1-217ENST00000543205 BAHCC1Q9P281 2608 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 E7EVH7 732 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PROB1E7EW31 1015 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 AP3D1O14617 1153 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PSMD3O43242 534 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PHF2O75151 1096 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 LMNAP02545 664 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PRKCGP05129 697 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PDHA1P08559 390 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CTPS1P17812 591 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PSMB4P28070 264 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 MAT2AP31153 395 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SSTR4P31391 388 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 COILP38432 576 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KCNJ1P48048 391 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 LMAN1P49257 510 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CLCN7P51798 805 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PNLIPRP1P54315 467 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 WNT3AP56704 352 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 TAS2R38P59533 333 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ARF3P61204 181 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RPL26P61254 145 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RPS21P63220 83 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ARF1P84077 181 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 IRF9Q00978 393 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CDK18Q07002 472 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SGCGQ13326 291 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 IL10RAQ13651 578 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 WSCD2Q2TBF2 565 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 TMEM52BQ4KMG9 183 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 LAIR1Q6GTX8 287 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KIAA1161Q6NSJ0 714 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 C16orf87Q6PH81 154 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC137Q6PK04 289 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CCBE1Q6UXH8 406 aaPredicted RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 C4orf22Q6V702 233 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC91Q7Z6B0 441 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 TRIM69Q86WT6 500 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 HORMAD1Q86X24 394 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 IPMKQ8NFU5 416 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GRK7Q8WTQ7 553 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PIH1D2Q8WWB5 315 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RTP4Q96DX8 246 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 LOXL4Q96JB6 756 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ZFYVE21Q9BQ24 234 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 WRAP53Q9BUR4 548 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PAK5Q9P286 719 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GMEB2Q9UKD1 530 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RPL26L1Q9UNX3 145 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SMG5Q9UPR3 1016 aaKnown RBP5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ITM2BQ9Y287 266 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 MAN2B2Q9Y2E5 1009 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ZNF281Q9Y2X9 895 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SPTBN2O15020 2390 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SHROOM3Q8TF72 1996 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 IGLON5A6NGN9 336 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 A8MX80 341 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 H3BS24 57 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CCDC188H7C350 402 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 UBE2CO00762 179 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 METTL18O95568 372 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 NDST3O95803 873 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GAS8O95995 478 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PRLP01236 227 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 EPOP01588 193 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ELFN1P0C7U0 828 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ETS1P14921 441 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 BRAFP15056 766 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GNSP15586 552 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 VIPR1P32241 457 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 NUDT1P36639 197 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 FDFT1P37268 417 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PTGER3P43115 390 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 FNTAP49354 379 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PPP2CBP62714 309 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PPP2CAP67775 309 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SEMG2Q02383 582 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CREB5Q02930 508 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ARHGEF7Q14155 803 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GALNT3Q14435 633 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 IHHQ14623 411 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 CYP1B1Q16678 543 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SEL1L3Q68CR1 1132 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KDELC1Q6UW63 502 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 RAPH1Q70E73 1250 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 DPPA4Q7L190 304 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 ASCL5Q7RTU5 278 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 THAP5Q7Z6K1 395 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 GALNT7Q86SF2 657 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PRUNE1Q86TP1 453 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KLHL7Q8IXQ5 586 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 SLC25A41Q8N5S1 370 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 MOSPD2Q8NHP6 518 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 KIF18AQ8NI77 898 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 PIGKQ92643 395 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 FBXW5Q969U6 566 aa5.06□□□□□ -1.6
CLIP1-217ENST00000543205 TADA1Q96BN2 335 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms